Difference between revisions of "RXN-16380"

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(Created page with "Category:reaction == Reaction 4.2.1.58-RXN == * common-name: ** (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase ** 3-hydroxyacyl-acp dehydratase fabz * ec-number:...")
(Created page with "Category:reaction == Reaction NUCLEOTIDE-PYROPHOSPHATASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.9 ec-3.6.1.9] * direction: ** left-to-right * common-nam...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 4.2.1.58-RXN ==
+
== Reaction NUCLEOTIDE-PYROPHOSPHATASE-RXN ==
−
* common-name:
 
−
** (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase
 
−
** 3-hydroxyacyl-acp dehydratase fabz
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/3.6.1.9 ec-3.6.1.9]
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** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
−
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* synonymous:
+
* common-name:
−
** β-hydroxybutyryl acyl carrier protein (acp) dehydrase
+
** nucleoside triphosphate pyrophosphohydrolase
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** β-hydroxybutyryl acyl carrier  protein dehydrase
 
−
** crotonoyl-[acyl-carrier-protein] hydratase
 
−
** (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)
 
−
** (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase
 
−
** β-hydroxybutyryl acyl carrier protein dehydrase
 
−
** enoyl acyl carrier protein hydrase
 
−
** crotonyl acyl carrier protein hydratase
 
−
** 3-hydroxybutyryl acyl carrier protein dehydratase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Beta-3-hydroxybutyryl-ACPs]][c] '''=>''' 1 [[Crotonyl-ACPs]][c] '''+''' 1 [[WATER]][c]
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* 1 [[Nucleoside-Triphosphates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Nucleoside-Monophosphates]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS14115]]
+
* Gene: [[FISUC_RS02370]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS00310]]
+
* Gene: [[FSU_RS04260]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants):
 
−
** '''22''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi):
 
−
** '''20''' reactions found over '''31''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04428 R04428]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01532 R01532]
−
{{#set: common-name=(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase|3-hydroxyacyl-acp dehydratase fabz}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00056 R00056]
−
{{#set: ec-number=ec-2.3.1.86|ec-4.2.1.59|ec-2.3.1.85}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P22413 P22413]
 +
** [http://www.uniprot.org/uniprot/Q64610 Q64610]
 +
{{#set: ec-number=ec-3.6.1.9}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: synonymous=β-hydroxybutyryl acyl carrier  protein dehydrase|crotonoyl-[acyl-carrier-protein] hydratase|crotonyl acyl carrier protein hydratase|β-hydroxybutyryl acyl carrier protein (acp) dehydrase|β-hydroxybutyryl acyl carrier protein dehydrase|enoyl acyl carrier protein hydrase|(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)|3-hydroxybutyryl acyl carrier protein dehydratase|(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase}}
+
{{#set: common-name=nucleoside triphosphate pyrophosphohydrolase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Revision as of 17:07, 14 October 2022

Reaction NUCLEOTIDE-PYROPHOSPHATASE-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • nucleoside triphosphate pyrophosphohydrolase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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