Difference between revisions of "HOMOCYSMETB12-RXN"

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(Created page with "Category:reaction == Reaction 2.6.1.28-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.28 ec-2.6.1.28] * direction: ** reversible == Reaction formula == * 1 PH...")
(Created page with "Category:reaction == Reaction RXN-13008 == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86] ** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85] ** [htt...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.6.1.28-RXN ==
+
== Reaction RXN-13008 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.28 ec-2.6.1.28]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** 3-oxoacyl-acp reductase fabg
 +
** 3-oxoacyl-[acyl-carrier-protein] reductase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PHENYL-PYRUVATE]][c] '''+''' 1 [[TRP]][c] '''<=>''' 1 [[INDOLE_PYRUVATE]][c] '''+''' 1 [[PHE]][c]
+
* 1 [[3-OXO-EICOSAPENTAENOYL-ACP]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-HYDROXY-DOCOSAPENTAENOYL-ACP]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FSU_RS01260]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS12065]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS10110]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS15070]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7520]], terrequinone A biosynthesis:
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5081]], L-tryptophan degradation VIII (to tryptophol):
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: ec-number=ec-2.3.1.85|ec-2.3.1.86|ec-1.1.1.100}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13741 13741]
+
{{#set: direction=left-to-right}}
−
* LIGAND-RXN:
+
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] reductase|3-oxoacyl-acp reductase fabg}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01376 R01376]
+
{{#set: nb gene associated=4}}
−
{{#set: ec-number=ec-2.6.1.28}}
+
{{#set: nb pathway associated=0}}
−
{{#set: direction=reversible}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: nb gene associated=0}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
−
{{#set: reconstruction tool=meneco}}
 
−
{{#set: reconstruction comment=added for gapfilling}}
 
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
 

Revision as of 17:07, 14 October 2022

Reaction RXN-13008

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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