Difference between revisions of "ExchangeSeed-ATP"

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(Created page with "Category:reaction == Reaction 1.5.1.9-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.5.1.9 ec-1.5.1.9] * direction: ** left-to-right == Reaction formula == * 1 NA...")
(Created page with "Category:reaction == Reaction RXN-14986 == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.85 ec-1.1.1.85] * direction: ** left-to-right * common-name: ** 3-isopropylma...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.5.1.9-RXN ==
+
== Reaction RXN-14986 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.5.1.9 ec-1.5.1.9]
+
** [http://enzyme.expasy.org/EC/1.1.1.85 ec-1.1.1.85]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 3-isopropylmalate dehydrogenase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NAD]][c] '''+''' 1 [[SACCHAROPINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ALLYSINE]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-1130]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-3618]][c] '''+''' 1 [[NADH]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS04380]]
+
* Gene: [[FSU_RS15260]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
+
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS13280]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian):
+
* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered):
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
+
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: ec-number=ec-1.1.1.85}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24521 24521]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02313 R02313]
 
−
{{#set: ec-number=ec-1.5.1.9}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: common-name=3-isopropylmalate dehydrogenase}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=reactions_add_147_emile_annot}}
+
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Revision as of 17:07, 14 October 2022

Reaction RXN-14986

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • 3-isopropylmalate dehydrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7396, butanol and isobutanol biosynthesis (engineered):
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=ExchangeSeed-ATP&oldid=81516"