Difference between revisions of "ADENOSINE-NUCLEOSIDASE-RXN"
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(Created page with "Category:reaction == Reaction RXN-14225 == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3] * direction: ** left-to-right == Reaction formula == * 1 D-GL...") |
(Created page with "Category:reaction == Reaction 5.4.2.10-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/5.4.2.10 ec-5.4.2.10] * direction: ** reversible * common-name: ** phosphoglucos...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction 5.4.2.10-RXN == |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/5.4.2.10 ec-5.4.2.10] |
* direction: | * direction: | ||
− | ** | + | ** reversible |
+ | * common-name: | ||
+ | ** phosphoglucosamine mutase | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[D- | + | * 1 [[D-GLUCOSAMINE-6-P]][c] '''<=>''' 1 [[GLUCOSAMINE-1P]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[FISUC_RS07845]] |
− | ** Category: [[ | + | ** Category: [[annotation]] |
− | *** Source: [[ | + | *** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
+ | * Gene: [[FSU_RS09775]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I: | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY0-1261]], anhydromuropeptides recycling I: | ||
+ | ** '''7''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-6749]], CMP-legionaminate biosynthesis I: | ||
+ | ** '''2''' reactions found over '''10''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a |
+ | * category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23427 23427] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02060 R02060] |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-5.4.2.10}} |
− | {{#set: direction= | + | {{#set: direction=reversible}} |
− | {{#set: nb gene associated= | + | {{#set: common-name=phosphoglucosamine mutase}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=2}} |
− | {{#set: reconstruction category= | + | {{#set: nb pathway associated=3}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction comment= | + | {{#set: reconstruction tool=orthofinder|pathwaytools}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction comment=n.a}} |
+ | {{#set: reconstruction source=ecoli|plantarum|bifidobacterium|bthetaiotaomicron|fibrobacter_succinogenes2|faecalibacterium|fibrobacter_succinogenes1}} |
Revision as of 17:08, 14 October 2022
Contents
Reaction 5.4.2.10-RXN
- ec-number:
- direction:
- reversible
- common-name:
- phosphoglucosamine mutase
Reaction formula
- 1 D-GLUCOSAMINE-6-P[c] <=> 1 GLUCOSAMINE-1P[c]
Gene(s) associated with this reaction
- Gene: FISUC_RS07845
- Category: annotation
- Source: fibrobacter_succinogenes2, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: FSU_RS09775
- Category: annotation
- Source: fibrobacter_succinogenes1, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: ecoli, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: bifidobacterium, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: faecalibacterium, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: plantarum, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- UDPNAGSYN-PWY, UDP-N-acetyl-D-glucosamine biosynthesis I:
- 5 reactions found over 5 reactions in the full pathway
- PWY0-1261, anhydromuropeptides recycling I:
- 7 reactions found over 12 reactions in the full pathway
- PWY-6749, CMP-legionaminate biosynthesis I:
- 2 reactions found over 10 reactions in the full pathway
Reconstruction information
- category: orthology; source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- category: orthology; source: plantarum; tool: orthofinder; comment: n.a
- category: orthology; source: faecalibacterium; tool: orthofinder; comment: n.a
- category: orthology; source: ecoli; tool: orthofinder; comment: n.a
- category: annotation; source: fibrobacter_succinogenes2; tool: pathwaytools; comment: n.a
- category: annotation; source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- category: orthology; source: bifidobacterium; tool: orthofinder; comment: n.a
External links