Difference between revisions of "FSU 0240"

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(Created page with "Category:gene == Gene FSU_RS02760 == * transcription-direction: ** positive * centisome-position: ** 16.730375 * left-end-position: ** 642949 * right-end-position: **...")
(Created page with "Category:gene == Gene FSU_RS00725 == * transcription-direction: ** negative * centisome-position: ** 4.459298 * left-end-position: ** 171371 * right-end-position: ** 1...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene FSU_RS02760 ==
+
== Gene FSU_RS00725 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* centisome-position:
 
* centisome-position:
−
** 16.730375    
+
** 4.459298    
 
* left-end-position:
 
* left-end-position:
−
** 642949
+
** 171371
 
* right-end-position:
 
* right-end-position:
−
** 643911
+
** 172369
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[fibrobacter_23042021]]
+
* [[fsucgem]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[SERINE-O-ACETTRAN-RXN]]
+
* [[F16ALDOLASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8631]]
 +
** Category: [[manual]]
 +
*** source: [[add_expert_reactions]]; tool: [[unknown-tool]]; comment: added to improve flux in sugars
 +
* [[SEDOBISALDOL-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
−
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
+
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7870]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-1861]]
−
* [[PWY-7274]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
* [[P185-PWY]]
−
* [[CYSTSYN-PWY]]
+
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-1042]]
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
* [[SUCSYN-PWY]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[ANAGLYCOLYSIS-PWY]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[CALVIN-PWY]]
 +
** '''11''' reactions found over '''13''' reactions in the full pathway
 +
* [[GLYCOLYSIS]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY66-399]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[P341-PWY]]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-6142]]
 +
** '''10''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5484]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7385]]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY66-373]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY0-1517]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6936]]
+
</div>
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
{{#set: transcription-direction=positive}}
+
{{#set: centisome-position=4.459298   }}
−
{{#set: centisome-position=16.730375   }}
+
{{#set: left-end-position=171371}}
−
{{#set: left-end-position=642949}}
+
{{#set: right-end-position=172369}}
−
{{#set: right-end-position=643911}}
+
{{#set: organism associated=fsucgem}}
−
{{#set: organism associated=fibrobacter_23042021}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb pathway associated=15}}
−
{{#set: nb pathway associated=4}}
 

Revision as of 17:12, 14 October 2022

Gene FSU_RS00725

  • transcription-direction:
    • negative
  • centisome-position:
    • 4.459298
  • left-end-position:
    • 171371
  • right-end-position:
    • 172369

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-1861
    • 9 reactions found over 9 reactions in the full pathway
  • P185-PWY
    • 10 reactions found over 12 reactions in the full pathway
  • PWY-1042
    • 8 reactions found over 10 reactions in the full pathway
  • SUCSYN-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • CALVIN-PWY
    • 11 reactions found over 13 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • P341-PWY
    • 6 reactions found over 10 reactions in the full pathway
  • GLUCONEO-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-7385
    • 5 reactions found over 9 reactions in the full pathway
  • PWY66-373
    • 2 reactions found over 5 reactions in the full pathway
  • PWY0-1517
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_0240&oldid=83797"