Difference between revisions of "HOMOCYSMETB12-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-13008 == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86] ** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85] ** [htt...")
(Created page with "Category:reaction == Reaction HOMOCYSMETB12-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.13 ec-2.1.1.13] * direction: ** left-to-right * common-name: ** methi...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-13008 ==
+
== Reaction HOMOCYSMETB12-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/2.1.1.13 ec-2.1.1.13]
−
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 
−
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-oxoacyl-acp reductase fabg
+
** methionine synthase
−
** 3-oxoacyl-[acyl-carrier-protein] reductase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-OXO-EICOSAPENTAENOYL-ACP]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-HYDROXY-DOCOSAPENTAENOYL-ACP]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[5-METHYL-THF-GLU-N]][c] '''+''' 1 [[HOMO-CYS]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[THF-GLU-N]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01260]]
+
* Gene: [[FSU_RS07715]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS12065]]
+
* Gene: [[FISUC_RS05815]]
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FISUC_RS10110]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FISUC_RS15070]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis:
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[ADENOSYLHOMOCYSCAT-PWY]], L-methionine salvage from L-homocysteine:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-2201]], folate transformations I:
 +
** '''9''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-3841]], folate transformations II:
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7977]], L-methionine biosynthesis IV (archaea):
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[HSERMETANA-PWY]], L-methionine biosynthesis III:
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-2.3.1.85|ec-2.3.1.86|ec-1.1.1.100}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11173 11173]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00946 R00946]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q57195 Q57195]
 +
** [http://www.uniprot.org/uniprot/Q9RVQ6 Q9RVQ6]
 +
** [http://www.uniprot.org/uniprot/O33259 O33259]
 +
** [http://www.uniprot.org/uniprot/Q55786 Q55786]
 +
** [http://www.uniprot.org/uniprot/Q09582 Q09582]
 +
** [http://www.uniprot.org/uniprot/Q9Z2Q4 Q9Z2Q4]
 +
** [http://www.uniprot.org/uniprot/P13009 P13009]
 +
{{#set: ec-number=ec-2.1.1.13}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] reductase|3-oxoacyl-acp reductase fabg}}
+
{{#set: common-name=methionine synthase}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=7}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
 
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Revision as of 07:50, 17 October 2022

Reaction HOMOCYSMETB12-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • methionine synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • 1CMET2-PWY, N10-formyl-tetrahydrofolate biosynthesis:
    • 9 reactions found over 9 reactions in the full pathway
  • ADENOSYLHOMOCYSCAT-PWY, L-methionine salvage from L-homocysteine:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-2201, folate transformations I:
    • 9 reactions found over 12 reactions in the full pathway
  • PWY-3841, folate transformations II:
    • 10 reactions found over 11 reactions in the full pathway
  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I:
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7977, L-methionine biosynthesis IV (archaea):
    • 3 reactions found over 4 reactions in the full pathway
  • HSERMETANA-PWY, L-methionine biosynthesis III:
    • 3 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=HOMOCYSMETB12-RXN&oldid=86895"