Difference between revisions of "RXN-10658"
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(Created page with "Category:reaction == Reaction ExchangeSeed-5-AMINOPENTANOATE == * direction: ** reversible == Reaction formula == * 1.0 5-AMINOPENTANOATE[C-BOUNDARY] '''<=>''' 1.0 5...") |
(Created page with "Category:reaction == Reaction RXN0-961 == * direction: ** left-to-right * common-name: ** murein tripeptide amidase mpaa == Reaction formula == * 1 L-ALA-GAMMA-D-GLU-DAP...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction RXN0-961 == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
+ | * common-name: | ||
+ | ** murein tripeptide amidase mpaa | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[L-ALA-GAMMA-D-GLU-DAP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2190]][c] '''+''' 1 [[MESO-DIAMINOPIMELATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | * Gene: [[FSU_RS04065]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
+ | * Gene: [[FISUC_RS02180]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY0-1546]], muropeptide degradation: | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28399 28399] |
− | {{#set: nb pathway associated= | + | {{#set: direction=left-to-right}} |
− | {{#set: reconstruction category= | + | {{#set: common-name=murein tripeptide amidase mpaa}} |
− | {{#set: reconstruction tool= | + | {{#set: nb gene associated=2}} |
− | {{#set: reconstruction comment= | + | {{#set: nb pathway associated=1}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction category=annotation}} |
+ | {{#set: reconstruction tool=pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}} |
Revision as of 07:52, 17 October 2022
Contents
Reaction RXN0-961
- direction:
- left-to-right
- common-name:
- murein tripeptide amidase mpaa
Reaction formula
- 1 L-ALA-GAMMA-D-GLU-DAP[c] + 1 WATER[c] => 1 CPD0-2190[c] + 1 MESO-DIAMINOPIMELATE[c]
Gene(s) associated with this reaction
- Gene: FSU_RS04065
- Category: annotation
- Source: fibrobacter_succinogenes1, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
- Gene: FISUC_RS02180
- Category: annotation
- Source: fibrobacter_succinogenes2, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
Pathway(s)
- PWY0-1546, muropeptide degradation:
- 2 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: annotation; source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- category: annotation; source: fibrobacter_succinogenes2; tool: pathwaytools; comment: n.a
External links
- RHEA: