Difference between revisions of "CITSYN-RXN"
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(Created page with "Category:reaction == Reaction 3.4.21.89-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.4.21.89 ec-3.4.21.89] * direction: ** left-to-right * common-name: ** signal...") |
(Created page with "Category:reaction == Reaction 3.5.1.27-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.88 ec-3.5.1.88] * direction: ** left-to-right * common-name: ** peptide de...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction 3. | + | == Reaction 3.5.1.27-RXN == |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/3. | + | ** [http://enzyme.expasy.org/EC/3.5.1.88 ec-3.5.1.88] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** peptide deformylase |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[Charged-fMET-tRNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[L-Methionylaminoacyl-tRNAs]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[FSU_RS14045]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[FISUC_RS12075]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| Line 21: | Line 21: | ||
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | + | * LIGAND-RXN: | |
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R04268 R04268] | ||
* UNIPROT: | * UNIPROT: | ||
| − | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P44786 P44786] |
| − | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P0A6K3 P0A6K3] |
| − | + | {{#set: ec-number=ec-3.5.1.88}} | |
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| − | {{#set: ec-number=ec-3. | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=peptide deformylase}} |
{{#set: nb gene associated=2}} | {{#set: nb gene associated=2}} | ||
{{#set: nb pathway associated=0}} | {{#set: nb pathway associated=0}} | ||
Revision as of 07:52, 17 October 2022
Contents
Reaction 3.5.1.27-RXN
- ec-number:
- direction:
- left-to-right
- common-name:
- peptide deformylase
Reaction formula
- 1 Charged-fMET-tRNAs[c] + 1 WATER[c] => 1 FORMATE[c] + 1 L-Methionylaminoacyl-tRNAs[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: FSU_RS14045
- Category: annotation
- Source: fibrobacter_succinogenes1, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: FISUC_RS12075
- Category: annotation
- Source: fibrobacter_succinogenes2, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- category: annotation; source: fibrobacter_succinogenes2; tool: pathwaytools; comment: n.a
External links
