Difference between revisions of "CPD-18808"

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(Created page with "Category:gene == Gene FSU_RS08510 == * transcription-direction: ** negative * centisome-position: ** 54.283344 * left-end-position: ** 2086111 * right-end-position: **...")
(Created page with "Category:metabolite == Metabolite CPD-18808 == * common-name: ** a nascent peptidoglycan (meso-dap containing) with glcnac terminus * inchi-key: ** zjucbljpwmjppp-zbzlbufy...")
 
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene FSU_RS08510 ==
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== Metabolite CPD-18808 ==
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* transcription-direction:
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* common-name:
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** negative
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** a nascent peptidoglycan (meso-dap containing) with glcnac terminus
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* centisome-position:
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* inchi-key:
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** 54.283344   
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** zjucbljpwmjppp-zbzlbufysa-j
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* left-end-position:
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* molecular-weight:
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** 2086111
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** 1845.151
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* right-end-position:
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* smiles:
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** 2087514
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** cc(c)=cccc(/c)=c/ccc(/c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/cop(=o)([o-])op(=o)([o-])oc2([c@h](nc(=o)c)[c@@h](o[c@h](c)c(=o)n[c@@h](c)c(=o)n[c@@h](c(=o)[o-])ccc(=o)n[c@@h](ccc[c@@h]([n+])c(=o)[o-])c(n[c@h](c)c([o-])=o)=o)[c@h](o[c@h]1(o[c@h](co)[c@@h](o)[c@h](o)[c@@h](nc(=o)c)1))[c@@h](co)o2)
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[fibrobacter_23092020]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-17393]]
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* [[PHOSACETYLTRANS-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=a nascent peptidoglycan (meso-dap containing) with glcnac terminus}}
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*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=zjucbljpwmjppp-zbzlbufysa-j}}
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** Category: [[orthology]]
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{{#set: molecular-weight=1845.151}}
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
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*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
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*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
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* [[PTAALT-RXN]]
 
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** Category: [[orthology]]
 
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
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*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[PWY-6637]]
 
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-5482]]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[P3-PWY]]
 
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** '''2''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-5485]]
 
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** '''4''' reactions found over '''3''' reactions in the full pathway
 
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* [[FERMENTATION-PWY]]
 
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** '''14''' reactions found over '''16''' reactions in the full pathway
 
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* [[METH-ACETATE-PWY]]
 
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** '''2''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY4LZ-257]]
 
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** '''9''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY0-1477]]
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-5497]]
 
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** '''7''' reactions found over '''24''' reactions in the full pathway
 
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* [[P163-PWY]]
 
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** '''3''' reactions found over '''10''' reactions in the full pathway
 
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* [[P161-PWY]]
 
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY0-1312]]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[P122-PWY]]
 
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** '''17''' reactions found over '''18''' reactions in the full pathway
 
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* [[PWY-1281]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-5437]]
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7013]]
 
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=negative}}
 
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{{#set: centisome-position=54.283344    }}
 
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{{#set: left-end-position=2086111}}
 
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{{#set: right-end-position=2087514}}
 
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{{#set: organism associated=fibrobacter_23092020}}
 
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{{#set: nb reaction associated=2}}
 
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{{#set: nb pathway associated=16}}
 

Latest revision as of 11:14, 17 October 2022

Metabolite CPD-18808

  • common-name:
    • a nascent peptidoglycan (meso-dap containing) with glcnac terminus
  • inchi-key:
    • zjucbljpwmjppp-zbzlbufysa-j
  • molecular-weight:
    • 1845.151
  • smiles:
    • cc(c)=cccc(/c)=c/ccc(/c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/cop(=o)([o-])op(=o)([o-])oc2([c@h](nc(=o)c)[c@@h](o[c@h](c)c(=o)n[c@@h](c)c(=o)n[c@@h](c(=o)[o-])ccc(=o)n[c@@h](ccc[c@@h]([n+])c(=o)[o-])c(n[c@h](c)c([o-])=o)=o)[c@h](o[c@h]1(o[c@h](co)[c@@h](o)[c@h](o)[c@@h](nc(=o)c)1))[c@@h](co)o2)

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=CPD-18808&oldid=91439"