Difference between revisions of "2.3.1.179-RXN"

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(Created page with "Category:reaction == Reaction RXN-12093 == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.20 ec-6.3.4.20] * direction: ** left-to-right * common-name: ** 7-cyano-7-dea...")
(Created page with "Category:reaction == Reaction 2.3.1.179-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179] * direction: ** left-to-right * common-name: ** beta-ke...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12093 ==
+
== Reaction 2.3.1.179-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.4.20 ec-6.3.4.20]
+
** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 7-cyano-7-deazaguanine synthase quec
+
** beta-ketoacyl-acp synthase ii
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CPD-13043]][c] '''=>''' 1 [[7-CYANO-7-DEAZAGUANINE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Palmitoleoyl-ACPs]][c] '''=>''' 1 [[3-oxo-cis-vaccenoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01035]]
+
* Gene: [[FSU_RS01400]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[FSU_RS01605]]
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[FISUC_RS14845]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS15410]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS15210]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6703]], preQ0 biosynthesis:
+
* [[PWY-5973]], cis-vaccenate biosynthesis:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27983 27983]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14566 14566]
−
{{#set: ec-number=ec-6.3.4.20}}
+
{{#set: ec-number=ec-2.3.1.179}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=7-cyano-7-deazaguanine synthase quec}}
+
{{#set: common-name=beta-ketoacyl-acp synthase ii}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|orthofinder}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome|ecoli}}
+
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Latest revision as of 11:15, 17 October 2022

Reaction 2.3.1.179-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • beta-ketoacyl-acp synthase ii

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5973, cis-vaccenate biosynthesis:
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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