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| − | [[Category:metabolite]] | + | [[Category:reaction]] |
| − | == Metabolite ATP ==
| + | == Reaction 3.4.24.56-RXN == |
| − | * common-name:
| + | * ec-number: |
| − | ** atp
| + | ** [http://enzyme.expasy.org/EC/3.4.24.56 ec-3.4.24.56] |
| − | * inchi-key:
| + | * direction: |
| − | ** zkhqwzamyrwxga-kqynxxcusa-j
| + | ** left-to-right |
| − | * molecular-weight:
| + | == Reaction formula == |
| − | ** 503.152
| + | * 1 [[Insulysin-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 2 [[Peptides-holder]][c] |
| − | * smiles:
| + | == Gene(s) associated with this reaction == |
| − | ** c([c@h]3([c@h]([c@h]([c@h](n1(c2(n=cn=c(c(n=c1)=2)n)))o3)o)o))op([o-])(=o)op([o-])(=o)op([o-])(=o)[o-]
| + | * Gene: [[FSU_RS05515]] |
| − | == Reaction(s) known to consume the compound == | + | ** Category: [[manual]] |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | *** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars |
| − | * [[1-PHOSPHATIDYLINOSITOL-KINASE-RXN]]
| + | * Gene: [[FSU_RS05860]] |
| − | * [[2.7.1.145-RXN]]
| + | ** Category: [[manual]] |
| − | * [[2.7.1.148-RXN]]
| + | *** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars |
| − | * [[2.7.10.1-RXN]]
| + | * Gene: [[FSU_RS06920]] |
| − | * [[2.7.13.3-RXN]]
| + | ** Category: [[manual]] |
| − | * [[2.7.7.1-RXN]]
| + | *** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars |
| − | * [[2.7.8.25-RXN]] | + | == Pathway(s) == |
| − | * [[3.1.21.3-RXN]] | + | == Reconstruction information == |
| − | * [[3.6.3.1-RXN]] | + | * category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: present in the annotation part in the first version of the fibrobacter gem |
| − | * [[3.6.3.30-RXN]]
| + | == External links == |
| − | * [[3.6.3.35-RXN]]
| + | * UNIPROT: |
| − | * [[5-FORMYL-THF-CYCLO-LIGASE-RXN]]
| + | ** [http://www.uniprot.org/uniprot/P35559 P35559] |
| − | * [[5-OXOPROLINASE-ATP-HYDROLYSING-RXN]]
| + | ** [http://www.uniprot.org/uniprot/P22817 P22817] |
| − | * [[5.99.1.3-RXN]]
| + | ** [http://www.uniprot.org/uniprot/P14735 P14735] |
| − | * [[6-CARBOXYHEXANOATE--COA-LIGASE-RXN]]
| + | {{#set: ec-number=ec-3.4.24.56}} |
| − | * [[6.3.1.4-RXN]]
| + | {{#set: direction=left-to-right}} |
| − | * [[6.3.2.10-RXN]]
| + | {{#set: nb gene associated=3}} |
| − | * [[6.3.2.7-RXN]] | + | {{#set: nb pathway associated=0}} |
| − | * [[6.3.5.6-RXN]] | + | {{#set: reconstruction category=manual}} |
| − | * [[6.3.5.7-RXN]] | + | {{#set: reconstruction tool=curation}} |
| − | * [[6PFRUCTPHOS-RXN]]
| + | {{#set: reconstruction comment=present in the annotation part in the first version of the fibrobacter gem}} |
| − | * [[ABC-12-RXN]]
| + | {{#set: reconstruction source=add_expert_reactions}} |
| − | * [[ABC-14-RXN]] | |
| − | * [[ABC-24-RXN]]
| |
| − | * [[ABC-25-RXN]]
| |
| − | * [[ABC-27-RXN]]
| |
| − | * [[ABC-4-RXN]]
| |
| − | * [[ABC-5-RXN]]
| |
| − | * [[ABC-63-RXN]]
| |
| − | * [[ABC-7-RXN]]
| |
| − | * [[ACETATE--COA-LIGASE-RXN]]
| |
| − | * [[ACETATEKIN-RXN]] | |
| − | * [[ACETYL-COA-CARBOXYLTRANSFER-RXN]] | |
| − | * [[ACETYLGLUTKIN-RXN]] | |
| − | * [[ACYLCOASYN-RXN]] | |
| − | * [[ADENOSINE-KINASE-RXN]] | |
| − | * [[ADENYL-KIN-RXN]] | |
| − | * [[ADENYLATECYC-RXN]]
| |
| − | * [[AIRS-RXN]] | |
| − | * [[ALANINE--TRNA-LIGASE-RXN]] | |
| − | * [[ARGININE--TRNA-LIGASE-RXN]] | |
| − | * [[ARGSUCCINSYN-RXN]] | |
| − | * [[ASNSYNA-RXN]] | |
| − | * [[ASNSYNB-RXN]] | |
| − | * [[ASPARAGINE--TRNA-LIGASE-RXN]]
| |
| − | * [[ASPARTATE--TRNA-LIGASE-RXN]] | |
| − | * [[ASPARTATEKIN-RXN]] | |
| − | * [[ATP-DEAMINASE-RXN]]
| |
| − | * [[ATP-PYROPHOSPHATASE-RXN]]
| |
| − | * [[ATPASE-RXN]] | |
| − | * [[ATPPHOSPHORIBOSYLTRANS-RXN]] | |
| − | * [[ATPSYN-RXN]] | |
| − | * [[BIOTINLIG-RXN]] | |
| − | * [[CARBPSYN-RXN]]
| |
| − | * [[CDPKIN-RXN]]
| |
| − | * [[COBALADENOSYLTRANS-RXN]]
| |
| − | * [[COBINAMIDEKIN-RXN]]
| |
| − | * [[CTPSYN-RXN]]
| |
| − | * [[CYSTEINE--TRNA-LIGASE-RXN]]
| |
| − | * [[DADPKIN-RXN]]
| |
| − | * [[DALADALALIG-RXN]]
| |
| − | * [[DCDPKIN-RXN]]
| |
| − | * [[DEHYDDEOXGALACTKIN-RXN]]
| |
| − | * [[DEOXYADENOSINE-KINASE-RXN]]
| |
| − | * [[DEOXYADENYLATE-KINASE-RXN]]
| |
| − | * [[DEOXYGLUCONOKIN-RXN]]
| |
| − | * [[DEOXYGUANOSINE-KINASE-RXN]]
| |
| − | * [[DEPHOSPHOCOAKIN-RXN]]
| |
| − | * [[DETHIOBIOTIN-SYN-RXN]]
| |
| − | * [[DGDPKIN-RXN]]
| |
| − | * [[DIHYDROFOLATESYNTH-RXN]]
| |
| − | * [[DTDPKIN-RXN]]
| |
| − | * [[DTMPKI-RXN]]
| |
| − | * [[DUDPKIN-RXN]]
| |
| − | * [[DURIDKI-RXN]]
| |
| − | * [[ENTF-RXN]]
| |
| − | * [[ExchangeSeed-ATP]]
| |
| − | * [[Export_ATP]]
| |
| − | * [[FADSYN-RXN]]
| |
| − | * [[FGAMSYN-RXN]]
| |
| − | * [[FOLYLPOLYGLUTAMATESYNTH-RXN]]
| |
| − | * [[FORMATETHFLIG-RXN]]
| |
| − | * [[FORMYLTHFGLUSYNTH-RXN]]
| |
| − | * [[GARTRANSFORMYL2-RXN]]
| |
| − | * [[GDPKIN-RXN]]
| |
| − | * [[GDPPYPHOSKIN-RXN]]
| |
| − | * [[GLUC1PADENYLTRANS-RXN]]
| |
| − | * [[GLUCOKIN-RXN]]
| |
| − | * [[GLUCONOKIN-RXN]]
| |
| − | * [[GLURS-RXN]]
| |
| − | * [[GLUTAMINE--TRNA-LIGASE-RXN]]
| |
| − | * [[GLUTAMINESYN-RXN]]
| |
| − | * [[GLUTATHIONE-SYN-RXN]]
| |
| − | * [[GLUTCYSLIG-RXN]]
| |
| − | * [[GLUTKIN-RXN]]
| |
| − | * [[GLYCINE--TRNA-LIGASE-RXN]]
| |
| − | * [[GLYRIBONUCSYN-RXN]]
| |
| − | * [[GMKALT-RXN]]
| |
| − | * [[GMP-SYN-GLUT-RXN]]
| |
| − | * [[GMP-SYN-NH3-RXN]]
| |
| − | * [[GTPPYPHOSKIN-RXN]]
| |
| − | * [[GUANYL-KIN-RXN]]
| |
| − | * [[H2PTERIDINEPYROPHOSPHOKIN-RXN]]
| |
| − | * [[HEXOKINASE-RXN]]
| |
| − | * [[HISTIDINE--TRNA-LIGASE-RXN]]
| |
| − | * [[HOMOSERKIN-RXN]]
| |
| − | * [[INOSINEKIN-RXN]]
| |
| − | * [[ISOLEUCINE--TRNA-LIGASE-RXN]]
| |
| − | * [[KANAMYCIN-KINASE-RXN]]
| |
| − | * [[LEUCINE--TRNA-LIGASE-RXN]]
| |
| − | * [[LINOLENOYL-RXN]]
| |
| − | * [[LYSINE--TRNA-LIGASE-RXN]]
| |
| − | * [[METHIONINE--TRNA-LIGASE-RXN]]
| |
| − | * [[NAD-KIN-RXN]]
| |
| − | * [[NAD-SYNTH-GLN-RXN]]
| |
| − | * [[NAD-SYNTH-NH3-RXN]]
| |
| − | * [[NADH-KINASE-RXN]]
| |
| − | * [[NICONUCADENYLYLTRAN-RXN]]
| |
| − | * [[NITROGENASE-RXN]]
| |
| − | * [[NUCLEOSIDE-DIP-KIN-RXN]]
| |
| − | * [[O-SUCCINYLBENZOATE-COA-LIG-RXN]]
| |
| − | * [[OHMETPYRKIN-RXN]]
| |
| − | * [[PANTEPADENYLYLTRAN-RXN]]
| |
| − | * [[PANTOATE-BETA-ALANINE-LIG-RXN]]
| |
| − | * [[PANTOTHENATE-KIN-RXN]]
| |
| − | * [[PEPCARBOXYKIN-RXN]]
| |
| − | * [[PEPSYNTH-RXN]]
| |
| − | * [[PHENYLALANINE--TRNA-LIGASE-RXN]]
| |
| − | * [[PHOSGLYPHOS-RXN]]
| |
| − | * [[PHOSPHORIBULOKINASE-RXN]]
| |
| − | * [[PNKIN-RXN]]
| |
| − | * [[PROLINE--TRNA-LIGASE-RXN]]
| |
| − | * [[PROPKIN-RXN]]
| |
| − | * [[PROTEIN-KINASE-RXN]]
| |
| − | * [[PRPPSYN-RXN]]
| |
| − | * [[PYRAMKIN-RXN]]
| |
| − | * [[PYRIDOXKIN-RXN]]
| |
| − | * [[PYRIMSYN3-RXN]]
| |
| − | * [[PYRUVATE-CARBOXYLASE-RXN]]
| |
| − | * [[PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN]]
| |
| − | * [[R223-RXN]]
| |
| − | * [[R344-RXN]]
| |
| − | * [[R345-RXN]]
| |
| − | * [[RIBOFLAVINKIN-RXN]]
| |
| − | * [[RIBOSE-5-PHOSPHATE--AMMONIA-LIGASE-RXN]]
| |
| − | * [[RXN-10]]
| |
| − | * [[RXN-10066]]
| |
| − | * [[RXN-10819]]
| |
| − | * [[RXN-11135]]
| |
| − | * [[RXN-11832]]
| |
| − | * [[RXN-12002]]
| |
| − | * [[RXN-12093]]
| |
| − | * [[RXN-12184]]
| |
| − | * [[RXN-12720]]
| |
| − | * [[RXN-12978]]
| |
| − | * [[RXN-13202]]
| |
| − | * [[RXN-13290]]
| |
| − | * [[RXN-13614]]
| |
| − | * [[RXN-14093]]
| |
| − | * [[RXN-14120]]
| |
| − | * [[RXN-14122]]
| |
| − | * [[RXN-14196]]
| |
| − | * [[RXN-14228]]
| |
| − | * [[RXN-14325]]
| |
| − | * [[RXN-14569]]
| |
| − | * [[RXN-15005]]
| |
| − | * [[RXN-15733]]
| |
| − | * [[RXN-16165]]
| |
| − | * [[RXN-16380]]
| |
| − | * [[RXN-16389]]
| |
| − | * [[RXN-16393]]
| |
| − | * [[RXN-16401]]
| |
| − | * [[RXN-16402]]
| |
| − | * [[RXN-16415]]
| |
| − | * [[RXN-16418]]
| |
| − | * [[RXN-16756]]
| |
| − | * [[RXN-16820]]
| |
| − | * [[RXN-16909]]
| |
| − | * [[RXN-18446]]
| |
| − | * [[RXN-18447]]
| |
| − | * [[RXN-18448]]
| |
| − | * [[RXN-18510]]
| |
| − | * [[RXN-18511]]
| |
| − | * [[RXN-18693]]
| |
| − | * [[RXN-19004]]
| |
| − | * [[RXN-19343]]
| |
| − | * [[RXN-19372]]
| |
| − | * [[RXN-1961]]
| |
| − | * [[RXN-19751]]
| |
| − | * [[RXN-19960]]
| |
| − | * [[RXN-20080]]
| |
| − | * [[RXN-20082]]
| |
| − | * [[RXN-20190]]
| |
| − | * [[RXN-20400]]
| |
| − | * [[RXN-20406]]
| |
| − | * [[RXN-20526]]
| |
| − | * [[RXN-6261]]
| |
| − | * [[RXN-6341]]
| |
| − | * [[RXN-7614]]
| |
| − | * [[RXN-7904]]
| |
| − | * [[RXN-7913]]
| |
| − | * [[RXN-8626]]
| |
| − | * [[RXN-8627]]
| |
| − | * [[RXN-8769]]
| |
| − | * [[RXN-9386]]
| |
| − | * [[RXN-9623]]
| |
| − | * [[RXN-9644]]
| |
| − | * [[RXN-9673]]
| |
| − | * [[RXN0-2023]]
| |
| − | * [[RXN0-2161]]
| |
| − | * [[RXN0-2921]]
| |
| − | * [[RXN0-382]]
| |
| − | * [[RXN0-4261]]
| |
| − | * [[RXN0-4342]]
| |
| − | * [[RXN0-4522]]
| |
| − | * [[RXN0-5205]]
| |
| − | * [[RXN0-5208]]
| |
| − | * [[RXN0-6541]]
| |
| − | * [[RXN0-7115]]
| |
| − | * [[RXN0-7192]]
| |
| − | * [[RXN0-7238]]
| |
| − | * [[RXN0-7239]]
| |
| − | * [[RXN0-7248]]
| |
| − | * [[RXN0-742]]
| |
| − | * [[RXN0-745]]
| |
| − | * [[RXN66-469]]
| |
| − | * [[RXN66-477]]
| |
| − | * [[RXN66-480]]
| |
| − | * [[RXN66-483]]
| |
| − | * [[RXN66-484]]
| |
| − | * [[RXN66-555]]
| |
| − | * [[S-ADENMETSYN-RXN]]
| |
| − | * [[SAICARSYN-RXN]]
| |
| − | * [[SERINE--TRNA-LIGASE-RXN]]
| |
| − | * [[SHIKIMATE-KINASE-RXN]]
| |
| − | * [[SUCCCOASYN-RXN]]
| |
| − | * [[SULFATE-ADENYLYLTRANS-RXN]]
| |
| − | * [[TAGAKIN-RXN]]
| |
| − | * [[TETRAACYLDISACC4KIN-RXN]]
| |
| − | * [[THI-P-KIN-RXN]]
| |
| − | * [[THREONINE--TRNA-LIGASE-RXN]]
| |
| − | * [[THYKI-RXN]]
| |
| − | * [[TRANS-RXN-298]]
| |
| − | * [[TRANS-RXN0-202]]
| |
| − | * [[TRANS-RXN0-623]]
| |
| − | * [[TRNA-CYTIDYLYLTRANSFERASE-RXN]]
| |
| − | * [[TRNA-S-TRANSFERASE-RXN]]
| |
| − | * [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
| |
| − | * [[TYROSINE--TRNA-LIGASE-RXN]]
| |
| − | * [[TransportSeed-ATP]]
| |
| − | * [[UDP-NACMUR-ALA-LIG-RXN]]
| |
| − | * [[UDP-NACMURALA-GLU-LIG-RXN]]
| |
| − | * [[UDP-NACMURALGLDAPAALIG-RXN]]
| |
| − | * [[UDP-NACMURALGLDAPLIG-RXN]]
| |
| − | * [[UDPKIN-RXN]]
| |
| − | * [[VALINE--TRNA-LIGASE-RXN]]
| |
| − | * [[XYLULOKIN-RXN]]
| |
| − | * [[biomass]]
| |
| − | </div>
| |
| − | == Reaction(s) known to produce the compound == | |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * [[5.99.1.3-RXN]] | |
| − | * [[ACETATEKIN-RXN]]
| |
| − | * [[ACETYLGLUTKIN-RXN]]
| |
| − | * [[ADENYL-KIN-RXN]]
| |
| − | * [[ATP-DEAMINASE-RXN]] | |
| − | * [[ATPPHOSPHORIBOSYLTRANS-RXN]] | |
| − | * [[ATPSYN-RXN]] | |
| − | * [[COBALADENOSYLTRANS-RXN]] | |
| − | * [[ExchangeSeed-ATP]] | |
| − | * [[Export_ATP]] | |
| − | * [[FORMATETHFLIG-RXN]] | |
| − | * [[GMKALT-RXN]]
| |
| − | * [[GUANYL-KIN-RXN]]
| |
| − | * [[PEPDEPHOS-RXN]]
| |
| − | * [[PEPSYNTH-RXN]]
| |
| − | * [[PHOSGLYPHOS-RXN]]
| |
| − | * [[PHOSPHORIBULOKINASE-RXN]]
| |
| − | * [[PROPKIN-RXN]]
| |
| − | * [[PRPPSYN-RXN]]
| |
| − | * [[PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN]]
| |
| − | * [[RXN-10966]]
| |
| − | * [[RXN-11832]]
| |
| − | * [[RXN-14120]]
| |
| − | * [[RXN-14196]]
| |
| − | * [[RXN-14228]]
| |
| − | * [[RXN-14569]]
| |
| − | * [[SUCCCOASYN-RXN]]
| |
| − | * [[SULFATE-ADENYLYLTRANS-RXN]]
| |
| − | * [[TransportSeed-ATP]]
| |
| − | </div>
| |
| − | == Reaction(s) of unknown directionality == | |
| − | {{#set: common-name=atp}} | |
| − | {{#set: inchi-key=inchikey=zkhqwzamyrwxga-kqynxxcusa-j}} | |
| − | {{#set: molecular-weight=503.152}} | |
