Difference between revisions of "3.4.24.56-RXN"

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(Created page with "Category:reaction == Reaction 5-OXOPROLINASE-ATP-HYDROLYSING-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.2.9 ec-3.5.2.9] * direction: ** left-to-right == React...")
(Created page with "Category:reaction == Reaction 3.4.24.56-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.4.24.56 ec-3.4.24.56] * direction: ** left-to-right == Reaction formula == *...")
 
(2 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 5-OXOPROLINASE-ATP-HYDROLYSING-RXN ==
+
== Reaction 3.4.24.56-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.2.9 ec-3.5.2.9]
+
** [http://enzyme.expasy.org/EC/3.4.24.56 ec-3.4.24.56]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5-OXOPROLINE]][c] '''+''' 1 [[ATP]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[Insulysin-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 2 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FSU_RS05515]]
 +
** Category: [[manual]]
 +
*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
 +
* Gene: [[FSU_RS05860]]
 +
** Category: [[manual]]
 +
*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
 +
* Gene: [[FSU_RS06920]]
 +
** Category: [[manual]]
 +
*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7942]], 5-oxo-L-proline metabolism:
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-4041]], γ-glutamyl cycle:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_fva_test4]]; tool: [[curation]]; comment: added to get flux in proline
+
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: present in the annotation part in the first version of the fibrobacter gem
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10349 10349]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00251 R00251]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P97608 P97608]
+
** [http://www.uniprot.org/uniprot/P35559 P35559]
−
{{#set: ec-number=ec-3.5.2.9}}
+
** [http://www.uniprot.org/uniprot/P22817 P22817]
 +
** [http://www.uniprot.org/uniprot/P14735 P14735]
 +
{{#set: ec-number=ec-3.4.24.56}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=added to get flux in proline}}
+
{{#set: reconstruction comment=present in the annotation part in the first version of the fibrobacter gem}}
−
{{#set: reconstruction source=reactions_add_fva_test4}}
+
{{#set: reconstruction source=add_expert_reactions}}

Latest revision as of 11:15, 17 October 2022

Reaction 3.4.24.56-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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