Difference between revisions of "3.4.24.56-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-13614 == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3] * direction: ** left-to-right * common-name: ** long-chain fatt...")
(Created page with "Category:reaction == Reaction 3.4.24.56-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.4.24.56 ec-3.4.24.56] * direction: ** left-to-right == Reaction formula == *...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-13614 ==
+
== Reaction 3.4.24.56-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/3.4.24.56 ec-3.4.24.56]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** long-chain fatty acid--coa ligase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-3617]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-10267]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[Insulysin-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 2 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS14015]]
+
* Gene: [[FSU_RS05515]]
−
** Category: [[annotation]]
+
** Category: [[manual]]
−
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
−
* Gene: [[FISUC_RS12045]]
+
* Gene: [[FSU_RS05860]]
−
** Category: [[annotation]]
+
** Category: [[manual]]
−
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
 +
* Gene: [[FSU_RS06920]]
 +
** Category: [[manual]]
 +
*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7094]], fatty acid salvage:
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: present in the annotation part in the first version of the fibrobacter gem
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-6.2.1.3}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P35559 P35559]
 +
** [http://www.uniprot.org/uniprot/P22817 P22817]
 +
** [http://www.uniprot.org/uniprot/P14735 P14735]
 +
{{#set: ec-number=ec-3.4.24.56}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=long-chain fatty acid--coa ligase}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction comment=present in the annotation part in the first version of the fibrobacter gem}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=add_expert_reactions}}
−
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
 

Latest revision as of 11:15, 17 October 2022

Reaction 3.4.24.56-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=3.4.24.56-RXN&oldid=92166"