Difference between revisions of "RXN-8766"

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(Created page with "Category:reaction == Reaction 1TRANSKETO-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.2.1.1 ec-2.2.1.1] * direction: ** reversible * common-name: ** transketolase...")
(Created page with "Category:reaction == Reaction RXN-8766 == * common-name: ** cobalt-precorrin-6b methylase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.196 ec-2.1.1.196] * direction:...")
 
(2 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1TRANSKETO-RXN ==
+
== Reaction RXN-8766 ==
 +
* common-name:
 +
** cobalt-precorrin-6b methylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.2.1.1 ec-2.2.1.1]
+
** [http://enzyme.expasy.org/EC/2.1.1.196 ec-2.1.1.196]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** transketolase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-SEDOHEPTULOSE-7-P]][c] '''+''' 1 [[GAP]][c] '''<=>''' 1 [[RIBOSE-5P]][c] '''+''' 1 [[XYLULOSE-5-PHOSPHATE]][c]
+
* 1 [[CPD-9044]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-9048]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS02000]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FSU_RS03880]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P21-PWY]], pentose phosphate pathway (partial):
+
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''15''' reactions found over '''15''' reactions in the full pathway
−
* [[NONOXIPENT-PWY]], pentose phosphate pathway (non-oxidative branch):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[P124-PWY]], Bifidobacterium shunt:
 
−
** '''13''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-5723]], Rubisco shunt:
 
−
** '''8''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle):
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle):
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle:
 
−
** '''11''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[add_reactions_to_reach_targets]]; tool: [[curation]]; comment: added to reach cpd-691
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10511 10511]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=36068 36068]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01641 R01641]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07774 R07774]
−
* UNIPROT:
+
{{#set: common-name=cobalt-precorrin-6b methylase}}
−
** [http://www.uniprot.org/uniprot/P29401 P29401]
+
{{#set: ec-number=ec-2.1.1.196}}
−
** [http://www.uniprot.org/uniprot/P33570 P33570]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P21725 P21725]
+
{{#set: nb gene associated=0}}
−
** [http://www.uniprot.org/uniprot/Q58094 Q58094]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q9JTR1 Q9JTR1]
+
{{#set: reconstruction category=manual}}
−
** [http://www.uniprot.org/uniprot/Q9CF56 Q9CF56]
+
{{#set: reconstruction tool=curation}}
−
** [http://www.uniprot.org/uniprot/P21726 P21726]
+
{{#set: reconstruction comment=added to reach cpd-691}}
−
** [http://www.uniprot.org/uniprot/P47312 P47312]
+
{{#set: reconstruction source=add_reactions_to_reach_targets}}
−
** [http://www.uniprot.org/uniprot/Q9PM31 Q9PM31]
 
−
** [http://www.uniprot.org/uniprot/P43757 P43757]
 
−
** [http://www.uniprot.org/uniprot/Q58092 Q58092]
 
−
** [http://www.uniprot.org/uniprot/P45694 P45694]
 
−
** [http://www.uniprot.org/uniprot/Q52723 Q52723]
 
−
** [http://www.uniprot.org/uniprot/Q9Z475 Q9Z475]
 
−
** [http://www.uniprot.org/uniprot/P34736 P34736]
 
−
** [http://www.uniprot.org/uniprot/P33315 P33315]
 
−
** [http://www.uniprot.org/uniprot/Q42675 Q42675]
 
−
** [http://www.uniprot.org/uniprot/Q42676 Q42676]
 
−
** [http://www.uniprot.org/uniprot/Q42677 Q42677]
 
−
** [http://www.uniprot.org/uniprot/P46708 P46708]
 
−
** [http://www.uniprot.org/uniprot/P75611 P75611]
 
−
** [http://www.uniprot.org/uniprot/P73282 P73282]
 
−
** [http://www.uniprot.org/uniprot/Q49047 Q49047]
 
−
** [http://www.uniprot.org/uniprot/O20250 O20250]
 
−
** [http://www.uniprot.org/uniprot/O78327 O78327]
 
−
** [http://www.uniprot.org/uniprot/Q9URM2 Q9URM2]
 
−
** [http://www.uniprot.org/uniprot/Q9RFB7 Q9RFB7]
 
−
** [http://www.uniprot.org/uniprot/P23254 P23254]
 
−
** [http://www.uniprot.org/uniprot/P27302 P27302]
 
−
** [http://www.uniprot.org/uniprot/P29277 P29277]
 
−
** [http://www.uniprot.org/uniprot/P22976 P22976]
 
−
</div>
 
−
{{#set: ec-number=ec-2.2.1.1}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=transketolase}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=7}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=genome}}
 

Latest revision as of 11:15, 17 October 2022

Reaction RXN-8766

  • common-name:
    • cobalt-precorrin-6b methylase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
    • 15 reactions found over 15 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=RXN-8766&oldid=92212"