Difference between revisions of "RXN-16380"

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(Created page with "Category:metabolite == Metabolite 3-Hydroxy-Terminated-DNAs == * common-name: ** a [dna]-3'-hydroxyl == Reaction(s) known to consume the compound == * DNA-LIGASE-NAD+-RX...")
(Created page with "Category:reaction == Reaction RXN-16380 == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3] * direction: ** left-to-right * common-name: ** long-chain fatt...")
 
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[[Category:metabolite]]
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[[Category:reaction]]
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== Metabolite 3-Hydroxy-Terminated-DNAs ==
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== Reaction RXN-16380 ==
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* ec-number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
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* direction:
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** left-to-right
 
* common-name:
 
* common-name:
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** a [dna]-3'-hydroxyl
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** long-chain fatty acid--coa ligase
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== Reaction(s) known to consume the compound ==
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== Reaction formula ==
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* [[DNA-LIGASE-NAD+-RXN]]
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* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[STEARIC_ACID]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[STEAROYL-COA]][c]
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* [[RXN-17919]]
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== Gene(s) associated with this reaction  ==
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== Reaction(s) known to produce the compound ==
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* Gene: [[FISUC_RS12045]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=a [dna]-3'-hydroxyl}}
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*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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* Gene: [[FSU_RS14015]]
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** Category: [[annotation]]
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*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[PWY-5989]], stearate biosynthesis II (bacteria and plants):
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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{{#set: ec-number=ec-6.2.1.3}}
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{{#set: direction=left-to-right}}
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{{#set: common-name=long-chain fatty acid--coa ligase}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=orthofinder|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=fibrobacter_succinogenes2|faecalibacterium|fibrobacter_succinogenes1|bthetaiotaomicron}}

Latest revision as of 11:16, 17 October 2022

Reaction RXN-16380

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • long-chain fatty acid--coa ligase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5989, stearate biosynthesis II (bacteria and plants):
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=RXN-16380&oldid=92285"