Difference between revisions of "HOMOCYSMETB12-RXN"
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(Created page with "Category:metabolite == Metabolite Release-factor-L-glutamine == * common-name: ** a [release factor]-l-glutamine == Reaction(s) known to consume the compound == * RXN-14...") |
(Created page with "Category:reaction == Reaction HOMOCYSMETB12-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.13 ec-2.1.1.13] * direction: ** left-to-right * common-name: ** methi...") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction HOMOCYSMETB12-RXN == |
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.1.1.13 ec-2.1.1.13] | ||
+ | * direction: | ||
+ | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** methionine synthase |
− | == | + | == Reaction formula == |
− | * [[ | + | * 1 [[5-METHYL-THF-GLU-N]][c] '''+''' 1 [[HOMO-CYS]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[THF-GLU-N]][c] |
− | == | + | == Gene(s) associated with this reaction == |
− | == | + | * Gene: [[FSU_RS07715]] |
− | {{#set: common-name=a | + | ** Category: [[annotation]] |
+ | *** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[FISUC_RS05815]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | == Pathway(s) == | ||
+ | * [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: | ||
+ | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[ADENOSYLHOMOCYSCAT-PWY]], L-methionine salvage from L-homocysteine: | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-2201]], folate transformations I: | ||
+ | ** '''9''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-3841]], folate transformations II: | ||
+ | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7977]], L-methionine biosynthesis IV (archaea): | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[HSERMETANA-PWY]], L-methionine biosynthesis III: | ||
+ | ** '''3''' reactions found over '''2''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11173 11173] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00946 R00946] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q57195 Q57195] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RVQ6 Q9RVQ6] | ||
+ | ** [http://www.uniprot.org/uniprot/O33259 O33259] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55786 Q55786] | ||
+ | ** [http://www.uniprot.org/uniprot/Q09582 Q09582] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z2Q4 Q9Z2Q4] | ||
+ | ** [http://www.uniprot.org/uniprot/P13009 P13009] | ||
+ | {{#set: ec-number=ec-2.1.1.13}} | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=methionine synthase}} | ||
+ | {{#set: nb gene associated=2}} | ||
+ | {{#set: nb pathway associated=7}} | ||
+ | {{#set: reconstruction category=annotation}} | ||
+ | {{#set: reconstruction tool=pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}} |
Latest revision as of 11:16, 17 October 2022
Contents
Reaction HOMOCYSMETB12-RXN
- ec-number:
- direction:
- left-to-right
- common-name:
- methionine synthase
Reaction formula
- 1 5-METHYL-THF-GLU-N[c] + 1 HOMO-CYS[c] => 1 MET[c] + 1 THF-GLU-N[c]
Gene(s) associated with this reaction
- Gene: FSU_RS07715
- Category: annotation
- Source: fibrobacter_succinogenes1, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: FISUC_RS05815
- Category: annotation
- Source: fibrobacter_succinogenes2, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- 1CMET2-PWY, N10-formyl-tetrahydrofolate biosynthesis:
- 9 reactions found over 9 reactions in the full pathway
- ADENOSYLHOMOCYSCAT-PWY, L-methionine salvage from L-homocysteine:
- 1 reactions found over 3 reactions in the full pathway
- PWY-2201, folate transformations I:
- 9 reactions found over 12 reactions in the full pathway
- PWY-3841, folate transformations II:
- 10 reactions found over 11 reactions in the full pathway
- HOMOSER-METSYN-PWY, L-methionine biosynthesis I:
- 6 reactions found over 7 reactions in the full pathway
- PWY-7977, L-methionine biosynthesis IV (archaea):
- 3 reactions found over 4 reactions in the full pathway
- HSERMETANA-PWY, L-methionine biosynthesis III:
- 3 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: annotation; source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- category: annotation; source: fibrobacter_succinogenes2; tool: pathwaytools; comment: n.a
External links