Difference between revisions of "2-HALOACID-DEHALOGENASE-RXN"

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(Created page with "Category:reaction == Reaction RXN0-884 == * ec-number: ** [http://enzyme.expasy.org/EC/1.17.7.4 ec-1.17.7.4] * direction: ** left-to-right * common-name: ** 4-hydroxy-3-me...")
(Created page with "Category:reaction == Reaction 2-HALOACID-DEHALOGENASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.8.1.10 ec-3.8.1.10] ** [http://enzyme.expasy.org/EC/3.8.1.2 ec-...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-884 ==
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== Reaction 2-HALOACID-DEHALOGENASE-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.17.7.4 ec-1.17.7.4]
+
** [http://enzyme.expasy.org/EC/3.8.1.10 ec-3.8.1.10]
 +
** [http://enzyme.expasy.org/EC/3.8.1.2 ec-3.8.1.2]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
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** haloacid dehalogenase
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[CPD-4211]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c]
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* 1 [[S-2-Haloacids]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2R-Hydroxy-Fatty-Acids]][c] '''+''' 1 [[Halide-Anions]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS11675]]
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* Gene: [[FSU_RS12230]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
* Gene: [[FISUC_RS09730]]
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* Gene: [[FISUC_RS04815]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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* Gene: [[FISUC_RS10270]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I:
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-7560]], methylerythritol phosphate pathway II:
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24827 24827]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11193 11193]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R08210 R08210]
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** [http://www.genome.jp/dbget-bin/www_bget?R03830 R03830]
** [http://www.genome.jp/dbget-bin/www_bget?R07219 R07219]
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* UNIPROT:
{{#set: ec-number=ec-1.17.7.4}}
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** [http://www.uniprot.org/uniprot/P24069 P24069]
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** [http://www.uniprot.org/uniprot/P24070 P24070]
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** [http://www.uniprot.org/uniprot/Q59728 Q59728]
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** [http://www.uniprot.org/uniprot/Q59168 Q59168]
 +
{{#set: ec-number=ec-3.8.1.2|ec-3.8.1.10}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=4-hydroxy-3-methylbut-2-enyl diphosphate reductase}}
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{{#set: common-name=haloacid dehalogenase}}
{{#set: nb gene associated=2}}
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{{#set: nb gene associated=3}}
{{#set: nb pathway associated=2}}
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{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=genome}}
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{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Latest revision as of 11:16, 17 October 2022

Reaction 2-HALOACID-DEHALOGENASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links