Difference between revisions of "4.1.99.4-RXN"

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(Created page with "Category:reaction == Reaction 3.2.1.52-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.52 ec-3.2.1.52] * direction: ** left-to-right * common-name: ** beta-n-ace...")
(Created page with "Category:reaction == Reaction 4.1.99.4-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.99.7 ec-3.5.99.7] * direction: ** left-to-right == Reaction formula == * 1 [...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.2.1.52-RXN ==
+
== Reaction 4.1.99.4-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.52 ec-3.2.1.52]
+
** [http://enzyme.expasy.org/EC/3.5.99.7 ec-3.5.99.7]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** beta-n-acetylhexosaminidase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[N-Acetyl-beta-D-Hexosaminides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Alcohols]][c] '''+''' 1 [[N-acetyl-beta-D-hexosamines]][c]
+
* 1 [[CPD-68]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS10685]]
+
* Gene: [[FSU_RS15290]]
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** Category: [[annotation]]
+
** Category: [[manual]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
−
* Gene: [[FISUC_RS08745]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: present in the annotation part in the first version of the fibrobacter gem
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16934 16934]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00997 R00997]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P13723 P13723]
+
** [http://www.uniprot.org/uniprot/Q9V2L2 Q9V2L2]
−
** [http://www.uniprot.org/uniprot/P07686 P07686]
+
** [http://www.uniprot.org/uniprot/Q9WY68 Q9WY68]
−
** [http://www.uniprot.org/uniprot/Q04786 Q04786]
+
** [http://www.uniprot.org/uniprot/P30297 P30297]
−
** [http://www.uniprot.org/uniprot/P06865 P06865]
+
** [http://www.uniprot.org/uniprot/Q7M523 Q7M523]
−
** [http://www.uniprot.org/uniprot/P20060 P20060]
+
** [http://www.uniprot.org/uniprot/Q9URX3 Q9URX3]
−
** [http://www.uniprot.org/uniprot/Q9CFI2 Q9CFI2]
+
{{#set: ec-number=ec-3.5.99.7}}
−
** [http://www.uniprot.org/uniprot/Q9JVT3 Q9JVT3]
 
−
** [http://www.uniprot.org/uniprot/P29416 P29416]
 
−
** [http://www.uniprot.org/uniprot/Q54468 Q54468]
 
−
** [http://www.uniprot.org/uniprot/P39848 P39848]
 
−
{{#set: ec-number=ec-3.2.1.52}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=beta-n-acetylhexosaminidase}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=present in the annotation part in the first version of the fibrobacter gem}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=add_expert_reactions}}

Latest revision as of 11:17, 17 October 2022

Reaction 4.1.99.4-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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