Difference between revisions of "RXN0-383"

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(Created page with "Category:reaction == Reaction HOMOCYSMETB12-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.13 ec-2.1.1.13] * direction: ** left-to-right * common-name: ** methi...")
(Created page with "Category:reaction == Reaction RXN0-383 == * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.9 ec-3.6.1.9] ** [http://enzyme.expasy.org/EC/3.6.1.65 ec-3.6.1.65] * directio...")
 
(14 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HOMOCYSMETB12-RXN ==
+
== Reaction RXN0-383 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.13 ec-2.1.1.13]
+
** [http://enzyme.expasy.org/EC/3.6.1.9 ec-3.6.1.9]
 +
** [http://enzyme.expasy.org/EC/3.6.1.65 ec-3.6.1.65]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** methionine synthase
+
** nucleoside triphosphate pyrophosphohydrolase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5-METHYL-THF-GLU-N]][c] '''+''' 1 [[HOMO-CYS]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[THF-GLU-N]][c]
+
* 1 [[CTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS07715]]
+
* Gene: [[FSU_RS06495]]
 +
** Category: [[orthology]]
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FISUC_RS02370]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FISUC_RS05815]]
+
* Gene: [[FSU_RS04260]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis:
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[ADENOSYLHOMOCYSCAT-PWY]], L-methionine salvage from L-homocysteine:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-2201]], folate transformations I:
 
−
** '''7''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-3841]], folate transformations II:
 
−
** '''8''' reactions found over '''11''' reactions in the full pathway
 
−
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7977]], L-methionine biosynthesis IV (archaea):
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[HSERMETANA-PWY]], L-methionine biosynthesis III:
 
−
** '''3''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11173 11173]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27763 27763]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00946 R00946]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00515 R00515]
−
* UNIPROT:
+
{{#set: ec-number=ec-3.6.1.9|ec-3.6.1.65}}
−
** [http://www.uniprot.org/uniprot/Q57195 Q57195]
 
−
** [http://www.uniprot.org/uniprot/Q9RVQ6 Q9RVQ6]
 
−
** [http://www.uniprot.org/uniprot/O33259 O33259]
 
−
** [http://www.uniprot.org/uniprot/Q55786 Q55786]
 
−
** [http://www.uniprot.org/uniprot/Q09582 Q09582]
 
−
** [http://www.uniprot.org/uniprot/Q9Z2Q4 Q9Z2Q4]
 
−
** [http://www.uniprot.org/uniprot/P13009 P13009]
 
−
{{#set: ec-number=ec-2.1.1.13}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=methionine synthase}}
+
{{#set: common-name=nucleoside triphosphate pyrophosphohydrolase}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=ecoli|fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Latest revision as of 11:18, 17 October 2022

Reaction RXN0-383

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • nucleoside triphosphate pyrophosphohydrolase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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