Difference between revisions of "DEOXYGUANPHOSPHOR-RXN"

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(Created page with "Category:reaction == Reaction RXN0-4022 == * ec-number: ** [http://enzyme.expasy.org/EC/1.7.1.13 ec-1.7.1.13] * direction: ** left-to-right * common-name: ** nadph-depende...")
(Created page with "Category:reaction == Reaction DEOXYGUANPHOSPHOR-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.1 ec-2.4.2.1] * direction: ** reversible == Reaction formula == *...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-4022 ==
+
== Reaction DEOXYGUANPHOSPHOR-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.7.1.13 ec-1.7.1.13]
+
** [http://enzyme.expasy.org/EC/2.4.2.1 ec-2.4.2.1]
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** nadph-dependent 7-cyano-7-deazaguanine reductase quef
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[7-CYANO-7-DEAZAGUANINE]][c] '''+''' 2 [[NADPH]][c] '''+''' 3 [[PROTON]][c] '''=>''' 1 [[7-AMINOMETHYL-7-DEAZAGUANINE]][c] '''+''' 2 [[NADP]][c]
+
* 1 [[DEOXYGUANOSINE]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[DEOXY-D-RIBOSE-1-PHOSPHATE]][c] '''+''' 1 [[GUANINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FISUC_RS11590]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[FSU_RS13560]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6700]], queuosine biosynthesis:
+
* [[PWY-7179]], purine deoxyribonucleosides degradation I:
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7179-1]], purine deoxyribonucleosides degradation II:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_spontaneous]]; tool: [[meneco]]; comment: added for gapfilling
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13411 13411]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27741 27741]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R07605 R07605]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01969 R01969]
{{#set: ec-number=ec-1.7.1.13}}
+
{{#set: ec-number=ec-2.4.2.1}}
{{#set: direction=left-to-right}}
+
{{#set: direction=reversible}}
{{#set: common-name=nadph-dependent 7-cyano-7-deazaguanine reductase quef}}
+
{{#set: nb gene associated=0}}
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=2}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=meneco}}
{{#set: reconstruction tool=orthofinder|pathwaytools}}
+
{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_spontaneous}}
{{#set: reconstruction source=ecoli|genome}}
 

Latest revision as of 11:18, 17 October 2022

Reaction DEOXYGUANPHOSPHOR-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7179, purine deoxyribonucleosides degradation I:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7179-1, purine deoxyribonucleosides degradation II:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links