Difference between revisions of "DEOXYGUANPHOSPHOR-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 5.99.1.3-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/5.6.2.3 ec-5.6.2.3] * direction: ** reversible == Reaction formula == * 1 [[ATP]...")
(Created page with "Category:reaction == Reaction DEOXYGUANPHOSPHOR-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.1 ec-2.4.2.1] * direction: ** reversible == Reaction formula == *...")
 
(8 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 5.99.1.3-RXN ==
+
== Reaction DEOXYGUANPHOSPHOR-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.6.2.3 ec-5.6.2.3]
+
** [http://enzyme.expasy.org/EC/2.4.2.1 ec-2.4.2.1]
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[Double-Stranded-DNAs]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[Negatively-super-coiled-DNAs]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[DEOXYGUANOSINE]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[DEOXY-D-RIBOSE-1-PHOSPHATE]][c] '''+''' 1 [[GUANINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS06170]]
 
−
** Category: [[manual]]
 
−
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
−
* Gene: [[FSU_RS04460]]
 
−
** Category: [[manual]]
 
−
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
−
* Gene: [[FSU_RS03690]]
 
−
** Category: [[manual]]
 
−
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7179]], purine deoxyribonucleosides degradation I:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7179-1]], purine deoxyribonucleosides degradation II:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_spontaneous]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* RHEA:
−
* UNIPROT:
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27741 27741]
−
** [http://www.uniprot.org/uniprot/Q7M3G2 Q7M3G2]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/Q02880 Q02880]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01969 R01969]
−
** [http://www.uniprot.org/uniprot/P0A0K8 P0A0K8]
+
{{#set: ec-number=ec-2.4.2.1}}
−
** [http://www.uniprot.org/uniprot/P41515 P41515]
 
−
** [http://www.uniprot.org/uniprot/P12531 P12531]
 
−
** [http://www.uniprot.org/uniprot/P27570 P27570]
 
−
** [http://www.uniprot.org/uniprot/Q03470 Q03470]
 
−
** [http://www.uniprot.org/uniprot/P35810 P35810]
 
−
** [http://www.uniprot.org/uniprot/P43701 P43701]
 
−
** [http://www.uniprot.org/uniprot/Q9JX55 Q9JX55]
 
−
** [http://www.uniprot.org/uniprot/Q9CH36 Q9CH36]
 
−
** [http://www.uniprot.org/uniprot/P20831 P20831]
 
−
** [http://www.uniprot.org/uniprot/Q9JTW5 Q9JTW5]
 
−
** [http://www.uniprot.org/uniprot/P33769 P33769]
 
−
** [http://www.uniprot.org/uniprot/P47250 P47250]
 
−
** [http://www.uniprot.org/uniprot/Q59189 Q59189]
 
−
** [http://www.uniprot.org/uniprot/P05652 P05652]
 
−
** [http://www.uniprot.org/uniprot/P43700 P43700]
 
−
** [http://www.uniprot.org/uniprot/P05653 P05653]
 
−
** [http://www.uniprot.org/uniprot/O87667 O87667]
 
−
** [http://www.uniprot.org/uniprot/Q9CGI5 Q9CGI5]
 
−
** [http://www.uniprot.org/uniprot/P23992 P23992]
 
−
** [http://www.uniprot.org/uniprot/P09176 P09176]
 
−
** [http://www.uniprot.org/uniprot/P06786 P06786]
 
−
** [http://www.uniprot.org/uniprot/P0AES6 P0AES6]
 
−
** [http://www.uniprot.org/uniprot/Q00942 Q00942]
 
−
** [http://www.uniprot.org/uniprot/P22447 P22447]
 
−
** [http://www.uniprot.org/uniprot/P08096 P08096]
 
−
** [http://www.uniprot.org/uniprot/P07065 P07065]
 
−
** [http://www.uniprot.org/uniprot/P0AES4 P0AES4]
 
−
** [http://www.uniprot.org/uniprot/P14829 P14829]
 
−
** [http://www.uniprot.org/uniprot/P77993 P77993]
 
−
** [http://www.uniprot.org/uniprot/P22840 P22840]
 
−
** [http://www.uniprot.org/uniprot/Q01320 Q01320]
 
−
** [http://www.uniprot.org/uniprot/P15348 P15348]
 
−
** [http://www.uniprot.org/uniprot/P13364 P13364]
 
−
** [http://www.uniprot.org/uniprot/P34203 P34203]
 
−
** [http://www.uniprot.org/uniprot/P50074 P50074]
 
−
** [http://www.uniprot.org/uniprot/P34031 P34031]
 
−
** [http://www.uniprot.org/uniprot/Q50404 Q50404]
 
−
** [http://www.uniprot.org/uniprot/Q50405 Q50405]
 
−
** [http://www.uniprot.org/uniprot/Q50406 Q50406]
 
−
** [http://www.uniprot.org/uniprot/P41513 P41513]
 
−
** [http://www.uniprot.org/uniprot/Q43906 Q43906]
 
−
** [http://www.uniprot.org/uniprot/P30182 P30182]
 
−
** [http://www.uniprot.org/uniprot/P37411 P37411]
 
−
** [http://www.uniprot.org/uniprot/P0A0L0 P0A0L0]
 
−
** [http://www.uniprot.org/uniprot/Q50435 Q50435]
 
−
** [http://www.uniprot.org/uniprot/P22446 P22446]
 
−
** [http://www.uniprot.org/uniprot/P77966 P77966]
 
−
** [http://www.uniprot.org/uniprot/Q48974 Q48974]
 
−
** [http://www.uniprot.org/uniprot/Q48995 Q48995]
 
−
** [http://www.uniprot.org/uniprot/Q49017 Q49017]
 
−
** [http://www.uniprot.org/uniprot/O68071 O68071]
 
−
** [http://www.uniprot.org/uniprot/O68140 O68140]
 
−
** [http://www.uniprot.org/uniprot/O24308 O24308]
 
−
** [http://www.uniprot.org/uniprot/Q57532 Q57532]
 
−
** [http://www.uniprot.org/uniprot/O41065 O41065]
 
−
** [http://www.uniprot.org/uniprot/Q9ZNN5 Q9ZNN5]
 
−
** [http://www.uniprot.org/uniprot/Q9ZNN4 Q9ZNN4]
 
−
** [http://www.uniprot.org/uniprot/Q9ZNN3 Q9ZNN3]
 
−
** [http://www.uniprot.org/uniprot/Q9ZNN2 Q9ZNN2]
 
−
** [http://www.uniprot.org/uniprot/Q9ZNN1 Q9ZNN1]
 
−
** [http://www.uniprot.org/uniprot/Q9ZNN0 Q9ZNN0]
 
−
** [http://www.uniprot.org/uniprot/O87117 O87117]
 
−
** [http://www.uniprot.org/uniprot/Q9WXF4 Q9WXF4]
 
−
** [http://www.uniprot.org/uniprot/O50627 O50627]
 
−
** [http://www.uniprot.org/uniprot/O50628 O50628]
 
−
** [http://www.uniprot.org/uniprot/P94604 P94604]
 
−
** [http://www.uniprot.org/uniprot/P94605 P94605]
 
−
** [http://www.uniprot.org/uniprot/Q9S5H9 Q9S5H9]
 
−
** [http://www.uniprot.org/uniprot/Q9ZNH3 Q9ZNH3]
 
−
** [http://www.uniprot.org/uniprot/Q9ZNH2 Q9ZNH2]
 
−
</div>
 
−
{{#set: ec-number=ec-5.6.2.3}}
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=reactions_add_147_emile_annot}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_spontaneous}}

Latest revision as of 11:18, 17 October 2022

Reaction DEOXYGUANPHOSPHOR-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7179, purine deoxyribonucleosides degradation I:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7179-1, purine deoxyribonucleosides degradation II:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=DEOXYGUANPHOSPHOR-RXN&oldid=93296"