Difference between revisions of "DEOXYGUANPHOSPHOR-RXN"

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(Created page with "Category:reaction == Reaction FGAMSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.5.3 ec-6.3.5.3] * direction: ** left-to-right * common-name: ** phosphoribosy...")
(Created page with "Category:reaction == Reaction DEOXYGUANPHOSPHOR-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.1 ec-2.4.2.1] * direction: ** reversible == Reaction formula == *...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction FGAMSYN-RXN ==
+
== Reaction DEOXYGUANPHOSPHOR-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.5.3 ec-6.3.5.3]
+
** [http://enzyme.expasy.org/EC/2.4.2.1 ec-2.4.2.1]
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
−
* common-name:
 
−
** phosphoribosylformylglycinamidine synthase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[DEOXYGUANOSINE]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[DEOXY-D-RIBOSE-1-PHOSPHATE]][c] '''+''' 1 [[GUANINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01705]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FISUC_RS15510]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I:
+
* [[PWY-7179]], purine deoxyribonucleosides degradation I:
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** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II:
+
* [[PWY-7179-1]], purine deoxyribonucleosides degradation II:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis:
 
−
** '''7''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_spontaneous]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17129 17129]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27741 27741]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04463 R04463]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01969 R01969]
−
* UNIPROT:
+
{{#set: ec-number=ec-2.4.2.1}}
−
** [http://www.uniprot.org/uniprot/O67691 O67691]
+
{{#set: direction=reversible}}
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** [http://www.uniprot.org/uniprot/Q9UXW5 Q9UXW5]
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{{#set: nb gene associated=0}}
−
** [http://www.uniprot.org/uniprot/Q9PNY0 Q9PNY0]
+
{{#set: nb pathway associated=2}}
−
** [http://www.uniprot.org/uniprot/O28339 O28339]
+
{{#set: reconstruction category=gap-filling}}
−
** [http://www.uniprot.org/uniprot/Q9PHZ7 Q9PHZ7]
+
{{#set: reconstruction tool=meneco}}
−
** [http://www.uniprot.org/uniprot/O26270 O26270]
+
{{#set: reconstruction comment=added for gapfilling}}
−
** [http://www.uniprot.org/uniprot/Q59042 Q59042]
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_spontaneous}}
−
** [http://www.uniprot.org/uniprot/Q58660 Q58660]
 
−
** [http://www.uniprot.org/uniprot/O27427 O27427]
 
−
** [http://www.uniprot.org/uniprot/Q9JWC5 Q9JWC5]
 
−
** [http://www.uniprot.org/uniprot/P35852 P35852]
 
−
** [http://www.uniprot.org/uniprot/P38972 P38972]
 
−
** [http://www.uniprot.org/uniprot/Q55843 Q55843]
 
−
** [http://www.uniprot.org/uniprot/Q55037 Q55037]
 
−
** [http://www.uniprot.org/uniprot/P12041 P12041]
 
−
** [http://www.uniprot.org/uniprot/P12042 P12042]
 
−
** [http://www.uniprot.org/uniprot/P15254 P15254]
 
−
** [http://www.uniprot.org/uniprot/O14228 O14228]
 
−
** [http://www.uniprot.org/uniprot/P35421 P35421]
 
−
** [http://www.uniprot.org/uniprot/Q9ZB07 Q9ZB07]
 
−
** [http://www.uniprot.org/uniprot/Q9ZB06 Q9ZB06]
 
−
</div>
 
−
{{#set: ec-number=ec-6.3.5.3}}
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=phosphoribosylformylglycinamidine synthase}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=genome}}
 

Latest revision as of 11:18, 17 October 2022

Reaction DEOXYGUANPHOSPHOR-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7179, purine deoxyribonucleosides degradation I:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7179-1, purine deoxyribonucleosides degradation II:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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