Difference between revisions of "FISUC RS10855"

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(Created page with "Category:reaction == Reaction DTDPDEHYDRHAMEPIM-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/5.1.3.13 ec-5.1.3.13] * direction: ** left-to-right * common-name: ** d...")
(Created page with "Category:gene == Gene FISUC_RS10855 == * transcription-direction: ** positive * centisome-position: ** 69.5032 * left-end-position: ** 2670754 * right-end-position: **...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction DTDPDEHYDRHAMEPIM-RXN ==
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== Gene FISUC_RS10855 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/5.1.3.13 ec-5.1.3.13]
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** positive
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* direction:
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* centisome-position:
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** left-to-right
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** 69.5032   
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* common-name:
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* left-end-position:
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** dtdp-4-dehydrorhamnose 3,5-epimerase
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** 2670754
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== Reaction formula ==
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* right-end-position:
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* 1 [[DTDP-DEOH-DEOXY-GLUCOSE]][c] '''=>''' 1 [[DTDP-DEOH-DEOXY-MANNOSE]][c]
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** 2673084
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[FISUC_RS03895]]
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[1.17.4.2-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS05790]]
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* [[RIBONUCLEOSIDE-TRIP-REDUCT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) ==
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* [[RXN0-723]]
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* [[PWY-7301]], dTDP-4-O-demethyl-β-L-noviose biosynthesis:
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** Category: [[annotation]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-7814]], dTDP-L-daunosamine biosynthesis:
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* [[RXN0-724]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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** Category: [[annotation]]
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* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis:
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[RXN0-745]]
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== Reconstruction information  ==
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** Category: [[annotation]]
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* [[RXN0-746]]
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* RHEA:
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** Category: [[annotation]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16969 16969]
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* LIGAND-RXN:
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== Pathway(s) associated ==
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** [http://www.genome.jp/dbget-bin/www_bget?R06514 R06514]
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* [[PWY0-166]]
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* UNIPROT:
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** '''11''' reactions found over '''13''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/Q9JWX1 Q9JWX1]
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* [[PWY-7187]]
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** [http://www.uniprot.org/uniprot/Q9JWW7 Q9JWW7]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/Q9UZG9 Q9UZG9]
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* [[PWY-7220]]
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** [http://www.uniprot.org/uniprot/P37745 P37745]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/Q7M0V5 Q7M0V5]
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* [[PWY-7222]]
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** [http://www.uniprot.org/uniprot/P37763 P37763]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/Q46770 Q46770]
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{{#set: transcription-direction=positive}}
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** [http://www.uniprot.org/uniprot/P29783 P29783]
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{{#set: centisome-position=69.5032    }}
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{{#set: ec-number=ec-5.1.3.13}}
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{{#set: left-end-position=2670754}}
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{{#set: direction=left-to-right}}
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{{#set: right-end-position=2673084}}
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{{#set: common-name=dtdp-4-dehydrorhamnose 3,5-epimerase}}
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{{#set: organism associated=fsucgem}}
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{{#set: nb gene associated=2}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=3}}
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{{#set: nb pathway associated=4}}
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:19, 17 October 2022

Gene FISUC_RS10855

  • transcription-direction:
    • positive
  • centisome-position:
    • 69.5032
  • left-end-position:
    • 2670754
  • right-end-position:
    • 2673084

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-166
    • 11 reactions found over 13 reactions in the full pathway
  • PWY-7187
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7220
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7222
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS10855&oldid=93546"