Difference between revisions of "FSU RS09895"

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(Created page with "Category:reaction == Reaction SPERMIDINESYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.16 ec-2.5.1.16] * direction: ** reversible == Reaction formula == * 1...")
(Created page with "Category:gene == Gene FSU_RS09895 == * transcription-direction: ** positive * centisome-position: ** 62.165928 * left-end-position: ** 2389039 * right-end-position: **...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction SPERMIDINESYN-RXN ==
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== Gene FSU_RS09895 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/2.5.1.16 ec-2.5.1.16]
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** positive
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* direction:
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* centisome-position:
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** reversible
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** 62.165928   
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== Reaction formula ==
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* left-end-position:
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* 1 [[PUTRESCINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''<=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SPERMIDINE]][c]
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** 2389039
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== Gene(s) associated with this reaction ==
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* right-end-position:
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* Gene: [[FSU_RS07710]]
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** 2391159
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** Category: [[orthology]]
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== Organism(s) associated with this gene ==
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*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* [[fsucgem]]
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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== Reaction(s) associated ==
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== Pathway(s) ==
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* [[2.7.10.1-RXN]]
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* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I:
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** Category: [[annotation]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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== Reconstruction information  ==
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{{#set: transcription-direction=positive}}
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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{{#set: centisome-position=62.165928    }}
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* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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{{#set: left-end-position=2389039}}
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== External links  ==
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{{#set: right-end-position=2391159}}
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* RHEA:
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{{#set: organism associated=fsucgem}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12724 12724]
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{{#set: nb reaction associated=1}}
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01920 R01920]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P19623 P19623]
 
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** [http://www.uniprot.org/uniprot/Q57761 Q57761]
 
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** [http://www.uniprot.org/uniprot/Q12074 Q12074]
 
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** [http://www.uniprot.org/uniprot/Q12455 Q12455]
 
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** [http://www.uniprot.org/uniprot/P09158 P09158]
 
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** [http://www.uniprot.org/uniprot/O48660 O48660]
 
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{{#set: ec-number=ec-2.5.1.16}}
 
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{{#set: direction=reversible}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=orthology}}
 
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{{#set: reconstruction tool=orthofinder}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=ecoli|faecalibacterium}}
 

Latest revision as of 11:19, 17 October 2022

Gene FSU_RS09895

  • transcription-direction:
    • positive
  • centisome-position:
    • 62.165928
  • left-end-position:
    • 2389039
  • right-end-position:
    • 2391159

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS09895&oldid=93593"