Difference between revisions of "FISUC RS03515"

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(Created page with "Category:reaction == Reaction ACYLCOASYN-RXN == * common-name: ** 2,3,4-saturated fatty acyl-coa synthetase ** long-chain fatty acid--coa ligase * ec-number: ** [http://en...")
 
(Created page with "Category:gene == Gene FISUC_RS03515 == * transcription-direction: ** positive * centisome-position: ** 21.626436 * left-end-position: ** 831025 * right-end-position: *...")
 
(16 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
== Reaction ACYLCOASYN-RXN ==
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== Gene FISUC_RS03515 ==
* common-name:
+
* transcription-direction:
** 2,3,4-saturated fatty acyl-coa synthetase
+
** positive
** long-chain fatty acid--coa ligase
+
* centisome-position:
* ec-number:
+
** 21.626436   
** [http://enzyme.expasy.org/EC/6.2.1 ec-6.2.1]
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* left-end-position:
* direction:
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** 831025
** left-to-right
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* right-end-position:
* synonymous:
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** 833787
** fatty acid thiokinase (long-chain)
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== Organism(s) associated with this gene  ==
** acyl-activating enzyme
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* [[fsucgem]]
== Reaction formula ==
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== Reaction(s) associated ==
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD66-39]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c]
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* [[VALINE--TRNA-LIGASE-RXN]]
== Gene(s) associated with this reaction  ==
 
* Gene: [[FSU_RS14015]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
* Gene: [[FISUC_RS12045]]
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== Pathway(s) associated ==
** Category: [[annotation]]
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* [[TRNA-CHARGING-PWY]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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** '''21''' reactions found over '''21''' reactions in the full pathway
== Pathway(s) ==
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{{#set: transcription-direction=positive}}
* [[FAO-PWY]], fatty acid β-oxidation I:
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{{#set: centisome-position=21.626436    }}
** '''2''' reactions found over '''7''' reactions in the full pathway
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{{#set: left-end-position=831025}}
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome):
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{{#set: right-end-position=833787}}
** '''1''' reactions found over '''5''' reactions in the full pathway
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{{#set: organism associated=fsucgem}}
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome):
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{{#set: nb reaction associated=1}}
** '''1''' reactions found over '''7''' reactions in the full pathway
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{{#set: nb pathway associated=1}}
* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast):
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P18163 P18163]
 
** [http://www.uniprot.org/uniprot/P39518 P39518]
 
** [http://www.uniprot.org/uniprot/O51162 O51162]
 
** [http://www.uniprot.org/uniprot/P39002 P39002]
 
** [http://www.uniprot.org/uniprot/Q9RYK3 Q9RYK3]
 
** [http://www.uniprot.org/uniprot/Q10776 Q10776]
 
** [http://www.uniprot.org/uniprot/O83181 O83181]
 
** [http://www.uniprot.org/uniprot/Q9RTR4 Q9RTR4]
 
** [http://www.uniprot.org/uniprot/P94547 P94547]
 
** [http://www.uniprot.org/uniprot/Q9YCF0 Q9YCF0]
 
** [http://www.uniprot.org/uniprot/Q9CHR0 Q9CHR0]
 
** [http://www.uniprot.org/uniprot/Q9JTK0 Q9JTK0]
 
** [http://www.uniprot.org/uniprot/P44446 P44446]
 
** [http://www.uniprot.org/uniprot/O30039 O30039]
 
** [http://www.uniprot.org/uniprot/O51539 O51539]
 
** [http://www.uniprot.org/uniprot/Q9JYJ7 Q9JYJ7]
 
** [http://www.uniprot.org/uniprot/P33121 P33121]
 
** [http://www.uniprot.org/uniprot/P33124 P33124]
 
** [http://www.uniprot.org/uniprot/P30624 P30624]
 
** [http://www.uniprot.org/uniprot/Q02602 Q02602]
 
** [http://www.uniprot.org/uniprot/P69451 P69451]
 
** [http://www.uniprot.org/uniprot/P69452 P69452]
 
** [http://www.uniprot.org/uniprot/Q8JZR0 Q8JZR0]
 
** [http://www.uniprot.org/uniprot/P47912 P47912]
 
** [http://www.uniprot.org/uniprot/P73004 P73004]
 
** [http://www.uniprot.org/uniprot/O81614 O81614]
 
** [http://www.uniprot.org/uniprot/O15840 O15840]
 
** [http://www.uniprot.org/uniprot/Q96537 Q96537]
 
** [http://www.uniprot.org/uniprot/Q96538 Q96538]
 
** [http://www.uniprot.org/uniprot/Q96338 Q96338]
 
** [http://www.uniprot.org/uniprot/Q9T009 Q9T009]
 
** [http://www.uniprot.org/uniprot/Q9T0A0 Q9T0A0]
 
** [http://www.uniprot.org/uniprot/Q9ZBW6 Q9ZBW6]
 
** [http://www.uniprot.org/uniprot/Q9X7Y5 Q9X7Y5]
 
** [http://www.uniprot.org/uniprot/Q9X7Z0 Q9X7Z0]
 
** [http://www.uniprot.org/uniprot/O60135 O60135]
 
</div>
 
{{#set: common-name=long-chain fatty acid--coa ligase|2,3,4-saturated fatty acyl-coa synthetase}}
 
{{#set: ec-number=ec-6.2.1}}
 
{{#set: direction=left-to-right}}
 
{{#set: synonymous=fatty acid thiokinase (long-chain)|acyl-activating enzyme}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome}}
 

Latest revision as of 11:19, 17 October 2022

Gene FISUC_RS03515

  • transcription-direction:
    • positive
  • centisome-position:
    • 21.626436
  • left-end-position:
    • 831025
  • right-end-position:
    • 833787

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated