Difference between revisions of "FISUC RS15510"

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(Created page with "Category:reaction == Reaction RXN-18693 == * ec-number: ** [http://enzyme.expasy.org/EC/2.8.1.13 ec-2.8.1.13] * direction: ** left-to-right * common-name: ** trna 2-thiour...")
(Created page with "Category:gene == Gene FISUC_RS15510 == * common-name: ** purl * transcription-direction: ** negative * centisome-position: ** 98.93578 * left-end-position: ** 3801741...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction RXN-18693 ==
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== Gene FISUC_RS15510 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.8.1.13 ec-2.8.1.13]
 
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** trna 2-thiouridine(34) synthase mnma
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** purl
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== Reaction formula ==
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* transcription-direction:
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* 1 [[ATP]][c] '''+''' 1 [[SAMP-C-Terminal-thiol]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[tRNA-uridine34]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SAMP-C-Terminal-Glycine]][c] '''+''' 1 [[tRNA-2-thiouridine34]][c]
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** negative
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[FISUC_RS04330]]
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** 98.93578   
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* left-end-position:
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** 3801741
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* right-end-position:
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** 3805616
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[FGAMSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS05355]]
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== Pathway(s) associated ==
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** Category: [[annotation]]
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* [[PWY-6277]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** '''7''' reactions found over '''5''' reactions in the full pathway
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* Gene: [[FSU_RS07250]]
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* [[PWY-6121]]
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** Category: [[annotation]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[PWY-6122]]
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* Gene: [[FSU_RS06220]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** Category: [[annotation]]
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{{#set: common-name=purl}}
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: transcription-direction=negative}}
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== Pathway(s)  ==
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{{#set: centisome-position=98.93578    }}
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* [[PWY-7887]], protein SAMPylation and SAMP-mediated thiolation:
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{{#set: left-end-position=3801741}}
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** '''1''' reactions found over '''6''' reactions in the full pathway
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{{#set: right-end-position=3805616}}
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== Reconstruction information  ==
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{{#set: organism associated=fsucgem}}
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: nb reaction associated=1}}
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== External links  ==
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{{#set: nb pathway associated=3}}
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{{#set: ec-number=ec-2.8.1.13}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=trna 2-thiouridine(34) synthase mnma}}
 
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{{#set: nb gene associated=4}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:19, 17 October 2022

Gene FISUC_RS15510

  • common-name:
    • purl
  • transcription-direction:
    • negative
  • centisome-position:
    • 98.93578
  • left-end-position:
    • 3801741
  • right-end-position:
    • 3805616

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6277
    • 7 reactions found over 5 reactions in the full pathway
  • PWY-6121
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6122
    • 5 reactions found over 5 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS15510&oldid=93722"