Difference between revisions of "FISUC RS15510"

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(Created page with "Category:reaction == Reaction SERINE--TRNA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.11 ec-6.1.1.11] * direction: ** left-to-right * common-name: **...")
(Created page with "Category:gene == Gene FISUC_RS15510 == * common-name: ** purl * transcription-direction: ** negative * centisome-position: ** 98.93578 * left-end-position: ** 3801741...")
 
(5 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction SERINE--TRNA-LIGASE-RXN ==
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== Gene FISUC_RS15510 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/6.1.1.11 ec-6.1.1.11]
 
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** serine--trna ligase
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** purl
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== Reaction formula ==
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* transcription-direction:
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* 1 [[ATP]][c] '''+''' 1 [[SER]][c] '''+''' 1 [[SER-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-SER-tRNAs]][c] '''+''' 1 [[PPI]][c]
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** negative
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[FSU_RS14025]]
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** 98.93578   
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* left-end-position:
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** 3801741
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* right-end-position:
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** 3805616
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[FGAMSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS12055]]
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== Pathway(s) associated ==
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** Category: [[annotation]]
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* [[PWY-6277]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** '''7''' reactions found over '''5''' reactions in the full pathway
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== Pathway(s) ==
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* [[PWY-6121]]
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* [[TRNA-CHARGING-PWY]], tRNA charging:
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** '''21''' reactions found over '''21''' reactions in the full pathway
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* [[PWY-6122]]
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== Reconstruction information  ==
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=purl}}
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== External links  ==
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{{#set: transcription-direction=negative}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: centisome-position=98.93578    }}
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* RHEA:
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{{#set: left-end-position=3801741}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12293 12293]
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{{#set: right-end-position=3805616}}
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* LIGAND-RXN:
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{{#set: organism associated=fsucgem}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03662 R03662]
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{{#set: nb reaction associated=1}}
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* UNIPROT:
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{{#set: nb pathway associated=3}}
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** [http://www.uniprot.org/uniprot/Q9ZCG5 Q9ZCG5]
 
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** [http://www.uniprot.org/uniprot/O51244 O51244]
 
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** [http://www.uniprot.org/uniprot/O66647 O66647]
 
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** [http://www.uniprot.org/uniprot/Q9PIB3 Q9PIB3]
 
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** [http://www.uniprot.org/uniprot/Q58477 Q58477]
 
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** [http://www.uniprot.org/uniprot/O27194 O27194]
 
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** [http://www.uniprot.org/uniprot/O84734 O84734]
 
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** [http://www.uniprot.org/uniprot/Q9X199 Q9X199]
 
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** [http://www.uniprot.org/uniprot/P47251 P47251]
 
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** [http://www.uniprot.org/uniprot/Q9JT77 Q9JT77]
 
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** [http://www.uniprot.org/uniprot/O83653 O83653]
 
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** [http://www.uniprot.org/uniprot/Q9Z736 Q9Z736]
 
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** [http://www.uniprot.org/uniprot/P49591 P49591]
 
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** [http://www.uniprot.org/uniprot/P56458 P56458]
 
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** [http://www.uniprot.org/uniprot/Q9ZJD9 Q9ZJD9]
 
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** [http://www.uniprot.org/uniprot/Q9CEX2 Q9CEX2]
 
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** [http://www.uniprot.org/uniprot/P43833 P43833]
 
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** [http://www.uniprot.org/uniprot/P26636 P26636]
 
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** [http://www.uniprot.org/uniprot/P39919 P39919]
 
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** [http://www.uniprot.org/uniprot/P37464 P37464]
 
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** [http://www.uniprot.org/uniprot/Q39230 Q39230]
 
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** [http://www.uniprot.org/uniprot/P75107 P75107]
 
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** [http://www.uniprot.org/uniprot/P73201 P73201]
 
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** [http://www.uniprot.org/uniprot/O82108 O82108]
 
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** [http://www.uniprot.org/uniprot/O82110 O82110]
 
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** [http://www.uniprot.org/uniprot/O81983 O81983]
 
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** [http://www.uniprot.org/uniprot/O45887 O45887]
 
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** [http://www.uniprot.org/uniprot/O14018 O14018]
 
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** [http://www.uniprot.org/uniprot/P54221 P54221]
 
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** [http://www.uniprot.org/uniprot/P07284 P07284]
 
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** [http://www.uniprot.org/uniprot/P0A8L1 P0A8L1]
 
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</div>
 
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{{#set: ec-number=ec-6.1.1.11}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=serine--trna ligase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:19, 17 October 2022

Gene FISUC_RS15510

  • common-name:
    • purl
  • transcription-direction:
    • negative
  • centisome-position:
    • 98.93578
  • left-end-position:
    • 3801741
  • right-end-position:
    • 3805616

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6277
    • 7 reactions found over 5 reactions in the full pathway
  • PWY-6121
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6122
    • 5 reactions found over 5 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS15510&oldid=93722"