Difference between revisions of "FISUC RS02460"

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(Created page with "Category:reaction == Reaction RXN-10780 == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3] * direction: ** left-to-right == Reaction formula == * 1 5-HY...")
(Created page with "Category:gene == Gene FISUC_RS02460 == * common-name: ** cysk * transcription-direction: ** negative * centisome-position: ** 14.823864 * left-end-position: ** 569627...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction RXN-10780 ==
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== Gene FISUC_RS02460 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3]
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** cysk
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* direction:
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* transcription-direction:
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** left-to-right
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** negative
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== Reaction formula ==
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* centisome-position:
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* 1 [[5-HYDROXYINDOLE_ACETALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[5-HYDROXYINDOLE_ACETATE]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
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** 14.823864   
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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* Gene: [[FSU_RS01755]]
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** 569627
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** Category: [[manual]]
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* right-end-position:
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*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
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** 570547
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== Pathway(s) ==
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== Organism(s) associated with this gene  ==
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* [[PWY-6313]], serotonin degradation:
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* [[fsucgem]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reaction(s) associated ==
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== Reconstruction information  ==
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* [[ACSERLY-RXN]]
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* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
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** Category: [[annotation]]
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== External links  ==
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* RHEA:
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* [[RXN-12726]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31216 31216]
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** Category: [[annotation]]
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* LIGAND-RXN:
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** [http://www.genome.jp/dbget-bin/www_bget?R04903 R04903]
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== Pathway(s) associated ==
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{{#set: ec-number=ec-1.2.1.3}}
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* [[CYSTSYN-PWY]]
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{{#set: direction=left-to-right}}
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** '''2''' reactions found over '''2''' reactions in the full pathway
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{{#set: nb gene associated=1}}
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* [[PWY-6936]]
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{{#set: nb pathway associated=1}}
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** '''3''' reactions found over '''5''' reactions in the full pathway
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{{#set: reconstruction category=manual}}
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{{#set: common-name=cysk}}
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{{#set: reconstruction tool=curation}}
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{{#set: transcription-direction=negative}}
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{{#set: reconstruction comment=present in the annotation part of the emile network.}}
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{{#set: centisome-position=14.823864    }}
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{{#set: reconstruction source=reactions_add_147_emile_annot}}
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{{#set: left-end-position=569627}}
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{{#set: right-end-position=570547}}
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{{#set: organism associated=fsucgem}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=2}}

Latest revision as of 11:19, 17 October 2022

Gene FISUC_RS02460

  • common-name:
    • cysk
  • transcription-direction:
    • negative
  • centisome-position:
    • 14.823864
  • left-end-position:
    • 569627
  • right-end-position:
    • 570547

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • CYSTSYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6936
    • 3 reactions found over 5 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS02460&oldid=93755"