Difference between revisions of "FISUC RS09230"

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(Created page with "Category:reaction == Reaction ORNDECARBOX-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.17 ec-4.1.1.17] * direction: ** left-to-right == Reaction formula == *...")
(Created page with "Category:gene == Gene FISUC_RS09230 == * transcription-direction: ** positive * centisome-position: ** 59.56603 * left-end-position: ** 2288905 * right-end-position: *...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction ORNDECARBOX-RXN ==
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== Gene FISUC_RS09230 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/4.1.1.17 ec-4.1.1.17]
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** positive
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* direction:
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* centisome-position:
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** left-to-right
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** 59.56603   
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== Reaction formula ==
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* left-end-position:
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* 1 [[L-ORNITHINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PUTRESCINE]][c]
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** 2288905
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== Gene(s) associated with this reaction  ==
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* right-end-position:
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== Pathway(s) ==
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** 2289786
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* [[PWY-6305]], putrescine biosynthesis IV:
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[CDPDIGLYSYN-RXN]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-20524]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5515]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-5981]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY0-1319]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[ORNDEG-PWY]], superpathway of ornithine degradation:
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* [[PWY-5667]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-46]], putrescine biosynthesis III:
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* [[PWY-7817]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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** '''4''' reactions found over '''16''' reactions in the full pathway
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== Reconstruction information  ==
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{{#set: transcription-direction=positive}}
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* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
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{{#set: centisome-position=59.56603    }}
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== External links  ==
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{{#set: left-end-position=2288905}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: right-end-position=2289786}}
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* RHEA:
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{{#set: organism associated=fsucgem}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22965 22965]
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{{#set: nb reaction associated=3}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00670 R00670]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P24169 P24169]
 
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** [http://www.uniprot.org/uniprot/P27121 P27121]
 
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** [http://www.uniprot.org/uniprot/P27116 P27116]
 
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** [http://www.uniprot.org/uniprot/P27120 P27120]
 
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** [http://www.uniprot.org/uniprot/P43099 P43099]
 
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** [http://www.uniprot.org/uniprot/Q9X2I6 Q9X2I6]
 
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** [http://www.uniprot.org/uniprot/P08432 P08432]
 
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** [http://www.uniprot.org/uniprot/P27118 P27118]
 
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** [http://www.uniprot.org/uniprot/P11926 P11926]
 
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** [http://www.uniprot.org/uniprot/P14019 P14019]
 
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** [http://www.uniprot.org/uniprot/P00860 P00860]
 
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** [http://www.uniprot.org/uniprot/P09057 P09057]
 
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** [http://www.uniprot.org/uniprot/Q9TZZ6 Q9TZZ6]
 
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** [http://www.uniprot.org/uniprot/P44317 P44317]
 
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** [http://www.uniprot.org/uniprot/O66940 O66940]
 
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** [http://www.uniprot.org/uniprot/P27119 P27119]
 
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** [http://www.uniprot.org/uniprot/P49725 P49725]
 
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** [http://www.uniprot.org/uniprot/P50134 P50134]
 
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** [http://www.uniprot.org/uniprot/P93351 P93351]
 
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** [http://www.uniprot.org/uniprot/P93357 P93357]
 
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** [http://www.uniprot.org/uniprot/O15696 O15696]
 
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** [http://www.uniprot.org/uniprot/Q84527 Q84527]
 
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** [http://www.uniprot.org/uniprot/P41931 P41931]
 
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** [http://www.uniprot.org/uniprot/O69865 O69865]
 
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** [http://www.uniprot.org/uniprot/Q9UQW9 Q9UQW9]
 
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</div>
 
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{{#set: ec-number=ec-4.1.1.17}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: nb gene associated=0}}
 
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{{#set: nb pathway associated=3}}
 
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{{#set: reconstruction category=manual}}
 
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{{#set: reconstruction tool=curation}}
 
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{{#set: reconstruction comment=added for gap-filling}}
 
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{{#set: reconstruction source=reactions_add_gp}}
 

Latest revision as of 11:19, 17 October 2022

Gene FISUC_RS09230

  • transcription-direction:
    • positive
  • centisome-position:
    • 59.56603
  • left-end-position:
    • 2288905
  • right-end-position:
    • 2289786

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5981
    • 4 reactions found over 5 reactions in the full pathway
  • PWY0-1319
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5667
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7817
    • 4 reactions found over 16 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS09230&oldid=93770"