Difference between revisions of "FISUC RS09230"

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(Created page with "Category:reaction == Reaction ACYLCOADEHYDROG-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.3.8 ec-1.3.8] * direction: ** left-to-right * common-name: ** acyl-coa...")
(Created page with "Category:gene == Gene FISUC_RS09230 == * transcription-direction: ** positive * centisome-position: ** 59.56603 * left-end-position: ** 2288905 * right-end-position: *...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction ACYLCOADEHYDROG-RXN ==
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== Gene FISUC_RS09230 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/1.3.8 ec-1.3.8]
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** positive
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* direction:
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* centisome-position:
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** left-to-right
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** 59.56603   
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* common-name:
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* left-end-position:
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** acyl-coa dehydrogenase
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** 2288905
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* synonymous:
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* right-end-position:
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** long-chain acyl coenzyme a dehydrogenase
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** 2289786
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** medium-chain acyl-coenzyme a dehydrogenase
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== Organism(s) associated with this gene  ==
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** fatty-acyl-coa dehydrogenase
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* [[fsucgem]]
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** fatty acyl coenzyme a dehydrogenase
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== Reaction(s) associated ==
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** acyl coenzyme a dehydrogenase
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* [[CDPDIGLYSYN-RXN]]
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** general acyl coa dehydrogenase
 
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** long-chain acyl-coa dehydrogenase
 
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== Reaction formula ==
 
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* 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
 
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== Gene(s) associated with this reaction  ==
 
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* Gene: [[FISUC_RS04750]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS06640]]
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* [[RXN-20524]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s)  ==
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* [[RXN0-5515]]
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* [[FAO-PWY]], fatty acid β-oxidation I:
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** Category: [[annotation]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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== Reconstruction information  ==
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== Pathway(s) associated ==
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-5981]]
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== External links  ==
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* RHEA:
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* [[PWY0-1319]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44705 44705]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* UNIPROT:
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* [[PWY-5667]]
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** [http://www.uniprot.org/uniprot/P16219 P16219]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/P45952 P45952]
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* [[PWY-7817]]
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** [http://www.uniprot.org/uniprot/P15651 P15651]
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** '''4''' reactions found over '''16''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/P11310 P11310]
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{{#set: transcription-direction=positive}}
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** [http://www.uniprot.org/uniprot/P08503 P08503]
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{{#set: centisome-position=59.56603    }}
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** [http://www.uniprot.org/uniprot/Q07417 Q07417]
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{{#set: left-end-position=2288905}}
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** [http://www.uniprot.org/uniprot/Q54857 Q54857]
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{{#set: right-end-position=2289786}}
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** [http://www.uniprot.org/uniprot/P45867 P45867]
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{{#set: organism associated=fsucgem}}
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** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
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{{#set: nb reaction associated=3}}
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** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
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{{#set: nb pathway associated=4}}
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** [http://www.uniprot.org/uniprot/Q96329 Q96329]
 
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{{#set: ec-number=ec-1.3.8}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=acyl-coa dehydrogenase}}
 
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{{#set: synonymous=fatty acyl coenzyme a dehydrogenase|long-chain acyl coenzyme a dehydrogenase|long-chain acyl-coa dehydrogenase|medium-chain acyl-coenzyme a dehydrogenase|general acyl coa dehydrogenase|fatty-acyl-coa dehydrogenase|acyl coenzyme a dehydrogenase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:19, 17 October 2022

Gene FISUC_RS09230

  • transcription-direction:
    • positive
  • centisome-position:
    • 59.56603
  • left-end-position:
    • 2288905
  • right-end-position:
    • 2289786

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5981
    • 4 reactions found over 5 reactions in the full pathway
  • PWY0-1319
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5667
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7817
    • 4 reactions found over 16 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS09230&oldid=93770"