Difference between revisions of "FSU RS13520"

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(Created page with "Category:reaction == Reaction LEUCINE--TRNA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.4 ec-6.1.1.4] * direction: ** left-to-right * common-name: **...")
 
(Created page with "Category:gene == Gene FSU_RS13520 == * common-name: ** trub * transcription-direction: ** positive * centisome-position: ** 85.22893 * left-end-position: ** 3275351 *...")
 
(15 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction LEUCINE--TRNA-LIGASE-RXN ==
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== Gene FSU_RS13520 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/6.1.1.4 ec-6.1.1.4]
 
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** leucine--trna ligase
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** trub
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== Reaction formula ==
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* transcription-direction:
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* 1 [[ATP]][c] '''+''' 1 [[LEU]][c] '''+''' 1 [[LEU-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-LEU-tRNAs]][c] '''+''' 1 [[PPI]][c]
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** positive
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[FISUC_RS05785]]
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** 85.22893   
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* left-end-position:
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** 3275351
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* right-end-position:
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** 3276307
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[RXN-11839]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS07685]]
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{{#set: common-name=trub}}
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** Category: [[annotation]]
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{{#set: transcription-direction=positive}}
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: centisome-position=85.22893    }}
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== Pathway(s)  ==
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{{#set: left-end-position=3275351}}
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* [[TRNA-CHARGING-PWY]], tRNA charging:
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{{#set: right-end-position=3276307}}
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** '''20''' reactions found over '''21''' reactions in the full pathway
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{{#set: organism associated=fsucgem}}
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== Reconstruction information  ==
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{{#set: nb reaction associated=1}}
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11689 11689]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03657 R03657]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/O27552 O27552]
 
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** [http://www.uniprot.org/uniprot/P56457 P56457]
 
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** [http://www.uniprot.org/uniprot/O51267 O51267]
 
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** [http://www.uniprot.org/uniprot/O83595 O83595]
 
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** [http://www.uniprot.org/uniprot/O84211 O84211]
 
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** [http://www.uniprot.org/uniprot/Q9Z930 Q9Z930]
 
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** [http://www.uniprot.org/uniprot/P47508 P47508]
 
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** [http://www.uniprot.org/uniprot/P36430 P36430]
 
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** [http://www.uniprot.org/uniprot/O66680 O66680]
 
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** [http://www.uniprot.org/uniprot/O67646 O67646]
 
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** [http://www.uniprot.org/uniprot/Q9ZDB1 Q9ZDB1]
 
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** [http://www.uniprot.org/uniprot/Q9WY15 Q9WY15]
 
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** [http://www.uniprot.org/uniprot/Q9PNK3 Q9PNK3]
 
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** [http://www.uniprot.org/uniprot/Q9JW39 Q9JW39]
 
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** [http://www.uniprot.org/uniprot/Q9ZJ63 Q9ZJ63]
 
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** [http://www.uniprot.org/uniprot/Q9JXT2 Q9JXT2]
 
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** [http://www.uniprot.org/uniprot/P43827 P43827]
 
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** [http://www.uniprot.org/uniprot/O58698 O58698]
 
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** [http://www.uniprot.org/uniprot/Q9CHB6 Q9CHB6]
 
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** [http://www.uniprot.org/uniprot/P26637 P26637]
 
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** [http://www.uniprot.org/uniprot/P75398 P75398]
 
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** [http://www.uniprot.org/uniprot/P73274 P73274]
 
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** [http://www.uniprot.org/uniprot/Q48955 Q48955]
 
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** [http://www.uniprot.org/uniprot/Q48964 Q48964]
 
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** [http://www.uniprot.org/uniprot/Q49051 Q49051]
 
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** [http://www.uniprot.org/uniprot/P11325 P11325]
 
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** [http://www.uniprot.org/uniprot/P07813 P07813]
 
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** [http://www.uniprot.org/uniprot/P10857 P10857]
 
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** [http://www.uniprot.org/uniprot/P15181 P15181]
 
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** [http://www.uniprot.org/uniprot/Q50192 Q50192]
 
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</div>
 
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{{#set: ec-number=ec-6.1.1.4}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=leucine--trna ligase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:19, 17 October 2022

Gene FSU_RS13520

  • common-name:
    • trub
  • transcription-direction:
    • positive
  • centisome-position:
    • 85.22893
  • left-end-position:
    • 3275351
  • right-end-position:
    • 3276307

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS13520&oldid=93793"