Difference between revisions of "FSU RS04985"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction AMP-DEAMINASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.17 ec-3.5.4.17] ** [http://enzyme.expasy.org/EC/3.5.4.6 ec-3.5.4.6] *...")
(Created page with "Category:gene == Gene FSU_RS04985 == * common-name: ** argf * transcription-direction: ** positive * centisome-position: ** 30.599762 * left-end-position: ** 1175950 *...")
 
(14 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction AMP-DEAMINASE-RXN ==
+
== Gene FSU_RS04985 ==
−
* ec-number:
+
* common-name:
−
** [http://enzyme.expasy.org/EC/3.5.4.17 ec-3.5.4.17]
+
** argf
−
** [http://enzyme.expasy.org/EC/3.5.4.6 ec-3.5.4.6]
+
* transcription-direction:
−
* direction:
+
** positive
−
** left-to-right
+
* centisome-position:
−
== Reaction formula ==
+
** 30.599762   
−
* 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[IMP]][c]
+
* left-end-position:
−
== Gene(s) associated with this reaction  ==
+
** 1175950
−
== Pathway(s)  ==
+
* right-end-position:
−
* [[PWY-6596]], adenosine nucleotides degradation I:
+
** 1176909
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
== Organism(s) associated with this gene  ==
−
== Reconstruction information  ==
+
* [[fsucgem]]
−
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
+
== Reaction(s) associated ==
−
== External links  ==
+
* [[ORNCARBAMTRANSFER-RXN]]
−
* RHEA:
+
** Category: [[annotation]]
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14778 14778]
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
* LIGAND-RXN:
+
* [[RXN-13482]]
−
** [http://www.genome.jp/dbget-bin/www_bget?R00181 R00181]
+
** Category: [[annotation]]
−
* UNIPROT:
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
** [http://www.uniprot.org/uniprot/P10759 P10759]
+
== Pathway(s) associated ==
−
** [http://www.uniprot.org/uniprot/Q02356 Q02356]
+
* [[PWY-4984]]
−
** [http://www.uniprot.org/uniprot/P23109 P23109]
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
** [http://www.uniprot.org/uniprot/P15274 P15274]
+
* [[PWY-4981]]
−
** [http://www.uniprot.org/uniprot/Q7M3H8 Q7M3H8]
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
** [http://www.uniprot.org/uniprot/Q01433 Q01433]
+
* [[ARGSYN-PWY]]
−
** [http://www.uniprot.org/uniprot/Q01432 Q01432]
+
** '''5''' reactions found over '''4''' reactions in the full pathway
−
{{#set: ec-number=ec-3.5.4.17|ec-3.5.4.6}}
+
* [[PWY-7400]]
−
{{#set: direction=left-to-right}}
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
{{#set: nb gene associated=0}}
+
* [[ARGSYNBSUB-PWY]]
−
{{#set: nb pathway associated=1}}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: reconstruction category=manual}}
+
* [[CITRULLINE-DEG-PWY]]
−
{{#set: reconstruction tool=curation}}
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: reconstruction comment=added for gap-filling}}
+
* [[CITRULBIO-PWY]]
−
{{#set: reconstruction source=reactions_add_gp}}
+
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
{{#set: common-name=argf}}
 +
{{#set: transcription-direction=positive}}
 +
{{#set: centisome-position=30.599762    }}
 +
{{#set: left-end-position=1175950}}
 +
{{#set: right-end-position=1176909}}
 +
{{#set: organism associated=fsucgem}}
 +
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=7}}

Latest revision as of 11:20, 17 October 2022

Gene FSU_RS04985

  • common-name:
    • argf
  • transcription-direction:
    • positive
  • centisome-position:
    • 30.599762
  • left-end-position:
    • 1175950
  • right-end-position:
    • 1176909

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-4984
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-4981
    • 5 reactions found over 6 reactions in the full pathway
  • ARGSYN-PWY
    • 5 reactions found over 4 reactions in the full pathway
  • PWY-7400
    • 7 reactions found over 9 reactions in the full pathway
  • ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • CITRULLINE-DEG-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • CITRULBIO-PWY
    • 8 reactions found over 8 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS04985&oldid=94063"