Difference between revisions of "FSU RS04985"

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(Created page with "Category:reaction == Reaction RXN-19249 == * ec-number: ** [http://enzyme.expasy.org/EC/3.4.16.4 ec-3.4.16.4] * direction: ** reversible * common-name: ** d-alanyl-d-alani...")
(Created page with "Category:gene == Gene FSU_RS04985 == * common-name: ** argf * transcription-direction: ** positive * centisome-position: ** 30.599762 * left-end-position: ** 1175950 *...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction RXN-19249 ==
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== Gene FSU_RS04985 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/3.4.16.4 ec-3.4.16.4]
 
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* direction:
 
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** reversible
 
 
* common-name:
 
* common-name:
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** d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase
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** argf
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** penicillin-binding protein 2
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* transcription-direction:
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== Reaction formula ==
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** positive
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* 1 [[CPD0-1965]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CPD-20746]][c] '''+''' 1 [[D-ALANINE]][c] '''+''' 1 [[PROTON]][c]
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* centisome-position:
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== Gene(s) associated with this reaction  ==
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** 30.599762   
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* Gene: [[FISUC_RS09490]]
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* left-end-position:
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** 1175950
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* right-end-position:
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** 1176909
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[ORNCARBAMTRANSFER-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS08120]]
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* [[RXN-13482]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS10050]]
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== Pathway(s) associated ==
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** Category: [[annotation]]
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* [[PWY-4984]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* Gene: [[FSU_RS11430]]
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* [[PWY-4981]]
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** Category: [[annotation]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[ARGSYN-PWY]]
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== Pathway(s)  ==
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** '''5''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[PWY-7400]]
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''7''' reactions found over '''9''' reactions in the full pathway
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== External links  ==
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* [[ARGSYNBSUB-PWY]]
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{{#set: ec-number=ec-3.4.16.4}}
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: direction=reversible}}
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* [[CITRULLINE-DEG-PWY]]
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{{#set: common-name=d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase|penicillin-binding protein 2}}
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** '''3''' reactions found over '''3''' reactions in the full pathway
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{{#set: nb gene associated=4}}
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* [[CITRULBIO-PWY]]
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{{#set: nb pathway associated=0}}
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** '''8''' reactions found over '''8''' reactions in the full pathway
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{{#set: reconstruction category=annotation}}
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{{#set: common-name=argf}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: transcription-direction=positive}}
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{{#set: reconstruction comment=n.a}}
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{{#set: centisome-position=30.599762    }}
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{{#set: reconstruction source=genome}}
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{{#set: left-end-position=1175950}}
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{{#set: right-end-position=1176909}}
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{{#set: organism associated=fsucgem}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=7}}

Latest revision as of 11:20, 17 October 2022

Gene FSU_RS04985

  • common-name:
    • argf
  • transcription-direction:
    • positive
  • centisome-position:
    • 30.599762
  • left-end-position:
    • 1175950
  • right-end-position:
    • 1176909

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-4984
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-4981
    • 5 reactions found over 6 reactions in the full pathway
  • ARGSYN-PWY
    • 5 reactions found over 4 reactions in the full pathway
  • PWY-7400
    • 7 reactions found over 9 reactions in the full pathway
  • ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • CITRULLINE-DEG-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • CITRULBIO-PWY
    • 8 reactions found over 8 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS04985&oldid=94063"