Difference between revisions of "FSU RS01990"

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(Created page with "Category:reaction == Reaction RXN-12456 == * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.91 ec-1.3.1.91] * direction: ** left-to-right * common-name: ** trna dihydrou...")
(Created page with "Category:gene == Gene FSU_RS01990 == * common-name: ** rpia * transcription-direction: ** positive * centisome-position: ** 12.318098 * left-end-position: ** 473385 *...")
 
(12 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction RXN-12456 ==
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== Gene FSU_RS01990 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/1.3.1.91 ec-1.3.1.91]
 
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** trna dihydrouridine(20/20a) synthase dusa
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** rpia
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== Reaction formula ==
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* transcription-direction:
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* 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Uracil20-in-tRNAs]][c] '''=>''' 1 [[56-Dihydrouracil20-in-tRNAs]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
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** positive
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[FSU_RS04980]]
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** 12.318098   
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* left-end-position:
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** 473385
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* right-end-position:
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** 474074
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[RIB5PISOM-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS03090]]
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== Pathway(s) associated ==
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** Category: [[annotation]]
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* [[NONOXIPENT-PWY]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Pathway(s)  ==
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* [[P124-PWY]]
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== Reconstruction information  ==
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** '''13''' reactions found over '''15''' reactions in the full pathway
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-5723]]
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== External links  ==
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** '''8''' reactions found over '''10''' reactions in the full pathway
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* RHEA:
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* [[PWY-1861]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=53338 53338]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: ec-number=ec-1.3.1.91}}
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* [[P185-PWY]]
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{{#set: direction=left-to-right}}
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** '''10''' reactions found over '''12''' reactions in the full pathway
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{{#set: common-name=trna dihydrouridine(20/20a) synthase dusa}}
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* [[CALVIN-PWY]]
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{{#set: nb gene associated=2}}
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** '''11''' reactions found over '''13''' reactions in the full pathway
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{{#set: nb pathway associated=0}}
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{{#set: common-name=rpia}}
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{{#set: reconstruction category=annotation}}
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{{#set: transcription-direction=positive}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: centisome-position=12.318098    }}
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{{#set: reconstruction comment=n.a}}
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{{#set: left-end-position=473385}}
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{{#set: reconstruction source=genome}}
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{{#set: right-end-position=474074}}
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{{#set: organism associated=fsucgem}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=6}}

Latest revision as of 11:20, 17 October 2022

Gene FSU_RS01990

  • common-name:
    • rpia
  • transcription-direction:
    • positive
  • centisome-position:
    • 12.318098
  • left-end-position:
    • 473385
  • right-end-position:
    • 474074

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • NONOXIPENT-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • P124-PWY
    • 13 reactions found over 15 reactions in the full pathway
  • PWY-5723
    • 8 reactions found over 10 reactions in the full pathway
  • PWY-1861
    • 9 reactions found over 9 reactions in the full pathway
  • P185-PWY
    • 10 reactions found over 12 reactions in the full pathway
  • CALVIN-PWY
    • 11 reactions found over 13 reactions in the full pathway





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