Difference between revisions of "FSU RS14775"

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(Created page with "Category:reaction == Reaction METHIONINE--TRNA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.10 ec-6.1.1.10] * direction: ** left-to-right * common-name...")
(Created page with "Category:gene == Gene FSU_RS14775 == * common-name: ** rsmd * transcription-direction: ** positive * centisome-position: ** 93.46787 * left-end-position: ** 3591974 *...")
 
(13 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction METHIONINE--TRNA-LIGASE-RXN ==
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== Gene FSU_RS14775 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/6.1.1.10 ec-6.1.1.10]
 
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** methionine--trna ligase
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** rsmd
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== Reaction formula ==
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* transcription-direction:
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* 1 [[ATP]][c] '''+''' 1 [[Elongation-tRNAMet]][c] '''+''' 1 [[MET]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-MET-tRNAs]][c] '''+''' 1 [[PPI]][c]
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** positive
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[FSU_RS00510]]
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** 93.46787   
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* left-end-position:
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** 3591974
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* right-end-position:
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** 3592516
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[RXN0-6515]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS14320]]
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{{#set: common-name=rsmd}}
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** Category: [[annotation]]
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{{#set: transcription-direction=positive}}
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: centisome-position=93.46787    }}
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== Pathway(s)  ==
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{{#set: left-end-position=3591974}}
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* [[TRNA-CHARGING-PWY]], tRNA charging:
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{{#set: right-end-position=3592516}}
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** '''20''' reactions found over '''21''' reactions in the full pathway
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{{#set: organism associated=fsucgem}}
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== Reconstruction information  ==
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{{#set: nb reaction associated=1}}
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13482 13482]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03659 R03659]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P56127 P56127]
 
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** [http://www.uniprot.org/uniprot/Q44951 Q44951]
 
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** [http://www.uniprot.org/uniprot/P47267 P47267]
 
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** [http://www.uniprot.org/uniprot/O84035 O84035]
 
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** [http://www.uniprot.org/uniprot/O28819 O28819]
 
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** [http://www.uniprot.org/uniprot/O58721 O58721]
 
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** [http://www.uniprot.org/uniprot/O83776 O83776]
 
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** [http://www.uniprot.org/uniprot/O33925 O33925]
 
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** [http://www.uniprot.org/uniprot/Q58659 Q58659]
 
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** [http://www.uniprot.org/uniprot/O66738 O66738]
 
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** [http://www.uniprot.org/uniprot/Q9ZCP0 Q9ZCP0]
 
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** [http://www.uniprot.org/uniprot/Q9PP85 Q9PP85]
 
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** [http://www.uniprot.org/uniprot/O26687 O26687]
 
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** [http://www.uniprot.org/uniprot/O67298 O67298]
 
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** [http://www.uniprot.org/uniprot/Q9JWP0 Q9JWP0]
 
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** [http://www.uniprot.org/uniprot/Q9ZKG9 Q9ZKG9]
 
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** [http://www.uniprot.org/uniprot/Q9Z959 Q9Z959]
 
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** [http://www.uniprot.org/uniprot/Q9CHE0 Q9CHE0]
 
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** [http://www.uniprot.org/uniprot/P43828 P43828]
 
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** [http://www.uniprot.org/uniprot/P56192 P56192]
 
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** [http://www.uniprot.org/uniprot/Q50319 Q50319]
 
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** [http://www.uniprot.org/uniprot/P23920 P23920]
 
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** [http://www.uniprot.org/uniprot/P75091 P75091]
 
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** [http://www.uniprot.org/uniprot/Q55729 Q55729]
 
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** [http://www.uniprot.org/uniprot/P22438 P22438]
 
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** [http://www.uniprot.org/uniprot/P00958 P00958]
 
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** [http://www.uniprot.org/uniprot/P00959 P00959]
 
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** [http://www.uniprot.org/uniprot/Q9M2T9 Q9M2T9]
 
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** [http://www.uniprot.org/uniprot/O23761 O23761]
 
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</div>
 
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{{#set: ec-number=ec-6.1.1.10}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=methionine--trna ligase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:20, 17 October 2022

Gene FSU_RS14775

  • common-name:
    • rsmd
  • transcription-direction:
    • positive
  • centisome-position:
    • 93.46787
  • left-end-position:
    • 3591974
  • right-end-position:
    • 3592516

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS14775&oldid=94192"