Difference between revisions of "FSU RS00290"

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(Created page with "Category:reaction == Reaction RXN0-3962 == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.4 ec-1.2.1.4] * direction: ** left-to-right == Reaction formula == * 1 ACET...")
(Created page with "Category:gene == Gene FSU_RS00290 == * common-name: ** fabd * transcription-direction: ** negative * centisome-position: ** 1.696017 * left-end-position: ** 65178 * ri...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction RXN0-3962 ==
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== Gene FSU_RS00290 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/1.2.1.4 ec-1.2.1.4]
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** fabd
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* direction:
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* transcription-direction:
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** left-to-right
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** negative
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== Reaction formula ==
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* centisome-position:
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* 1 [[ACETALD]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c]
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** 1.696017   
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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* Gene: [[FSU_RS01755]]
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** 65178
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** Category: [[manual]]
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* right-end-position:
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*** Source: [[reactions_add_43_emile_ortho_meta]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the orthology part of the emile network.
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** 66026
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== Pathway(s) ==
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== Organism(s) associated with this gene  ==
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* [[PWY-5768]], pyruvate fermentation to acetate VIII:
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* [[fsucgem]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reaction(s) associated ==
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* [[PWY-7268]], NAD/NADP-NADH/NADPH cytosolic interconversion (yeast):
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[2.3.1.180-RXN]]
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== Reconstruction information  ==
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** Category: [[orthology]]
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* category: [[manual]]; source: [[reactions_add_43_emile_ortho_meta]]; tool: [[curation]]; comment: present in the orthology part of the emile network.
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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== External links  ==
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* [[4.2.1.59-RXN]]
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* RHEA:
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** Category: [[orthology]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25299 25299]
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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* LIGAND-RXN:
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* [[ACP-S-ACETYLTRANSFER-RXN]]
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** [http://www.genome.jp/dbget-bin/www_bget?R00711 R00711]
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** Category: [[orthology]]
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{{#set: ec-number=ec-1.2.1.4}}
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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{{#set: direction=left-to-right}}
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* [[MALONYL-COA-ACP-TRANSACYL-RXN]]
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{{#set: nb gene associated=1}}
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** Category: [[annotation]]
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{{#set: nb pathway associated=2}}
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: reconstruction category=manual}}
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** Category: [[orthology]]
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{{#set: reconstruction tool=curation}}
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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{{#set: reconstruction comment=present in the orthology part of the emile network.}}
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*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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{{#set: reconstruction source=reactions_add_43_emile_ortho_meta}}
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*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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* [[RXN-20481]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-20482]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-20490]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-20498]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9537]]
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** Category: [[orthology]]
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-4381]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5994]]
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** '''20''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-5971]]
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** '''22''' reactions found over '''31''' reactions in the full pathway
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* [[FASYN-INITIAL-PWY]]
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** '''5''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5966]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6799]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-8012]]
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** '''2''' reactions found over '''26''' reactions in the full pathway
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* [[PWY-7388]]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-8047]]
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** '''2''' reactions found over '''19''' reactions in the full pathway
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* [[PWY-8049]]
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** '''2''' reactions found over '''14''' reactions in the full pathway
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</div>
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{{#set: common-name=fabd}}
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{{#set: transcription-direction=negative}}
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{{#set: centisome-position=1.696017    }}
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{{#set: left-end-position=65178}}
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{{#set: right-end-position=66026}}
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{{#set: organism associated=fsucgem}}
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{{#set: nb reaction associated=9}}
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{{#set: nb pathway associated=10}}

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS00290

  • common-name:
    • fabd
  • transcription-direction:
    • negative
  • centisome-position:
    • 1.696017
  • left-end-position:
    • 65178
  • right-end-position:
    • 66026

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-4381
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5994
    • 20 reactions found over 31 reactions in the full pathway
  • PWY-5971
    • 22 reactions found over 31 reactions in the full pathway
  • FASYN-INITIAL-PWY
    • 5 reactions found over 2 reactions in the full pathway
  • PWY-5966
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6799
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-8012
    • 2 reactions found over 26 reactions in the full pathway
  • PWY-7388
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-8047
    • 2 reactions found over 19 reactions in the full pathway
  • PWY-8049
    • 2 reactions found over 14 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS00290&oldid=94401"