Difference between revisions of "FSU RS03125"

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(Created page with "Category:reaction == Reaction GLYCINE--TRNA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.14 ec-6.1.1.14] * direction: ** left-to-right * common-name: *...")
(Created page with "Category:gene == Gene FSU_RS03125 == * common-name: ** hola * transcription-direction: ** positive * centisome-position: ** 18.895792 * left-end-position: ** 726166 *...")
 
(10 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction GLYCINE--TRNA-LIGASE-RXN ==
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== Gene FSU_RS03125 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/6.1.1.14 ec-6.1.1.14]
 
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** glycine--trna ligase
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** hola
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== Reaction formula ==
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* transcription-direction:
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* 1 [[ATP]][c] '''+''' 1 [[GLY]][c] '''+''' 1 [[GLY-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-GLY-tRNAs]][c] '''+''' 1 [[PPI]][c]
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** positive
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[FISUC_RS15370]]
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** 18.895792   
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* left-end-position:
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** 726166
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* right-end-position:
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** 727134
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS01565]]
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{{#set: common-name=hola}}
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** Category: [[annotation]]
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{{#set: transcription-direction=positive}}
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: centisome-position=18.895792    }}
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== Pathway(s)  ==
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{{#set: left-end-position=726166}}
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* [[TRNA-CHARGING-PWY]], tRNA charging:
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{{#set: right-end-position=727134}}
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** '''21''' reactions found over '''21''' reactions in the full pathway
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{{#set: organism associated=fsucgem}}
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== Reconstruction information  ==
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{{#set: nb reaction associated=1}}
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16014 16014]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03654 R03654]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P41250 P41250]
 
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** [http://www.uniprot.org/uniprot/P54380 P54380]
 
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** [http://www.uniprot.org/uniprot/Q9ZCB1 Q9ZCB1]
 
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** [http://www.uniprot.org/uniprot/P43822 P43822]
 
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** [http://www.uniprot.org/uniprot/P54381 P54381]
 
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** [http://www.uniprot.org/uniprot/O51344 O51344]
 
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** [http://www.uniprot.org/uniprot/Q46371 Q46371]
 
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** [http://www.uniprot.org/uniprot/Q9ZCB0 Q9ZCB0]
 
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** [http://www.uniprot.org/uniprot/Q9WY59 Q9WY59]
 
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** [http://www.uniprot.org/uniprot/P43821 P43821]
 
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** [http://www.uniprot.org/uniprot/O83678 O83678]
 
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** [http://www.uniprot.org/uniprot/Q9WY60 Q9WY60]
 
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** [http://www.uniprot.org/uniprot/Q9PPK3 Q9PPK3]
 
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** [http://www.uniprot.org/uniprot/P56454 P56454]
 
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** [http://www.uniprot.org/uniprot/Q9PN63 Q9PN63]
 
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** [http://www.uniprot.org/uniprot/Q57681 Q57681]
 
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** [http://www.uniprot.org/uniprot/P67029 P67029]
 
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** [http://www.uniprot.org/uniprot/O67081 O67081]
 
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** [http://www.uniprot.org/uniprot/O67898 O67898]
 
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** [http://www.uniprot.org/uniprot/O59235 O59235]
 
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** [http://www.uniprot.org/uniprot/P47493 P47493]
 
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** [http://www.uniprot.org/uniprot/Q9ZKP1 Q9ZKP1]
 
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** [http://www.uniprot.org/uniprot/Q9JW67 Q9JW67]
 
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** [http://www.uniprot.org/uniprot/P56453 P56453]
 
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** [http://www.uniprot.org/uniprot/O27874 O27874]
 
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** [http://www.uniprot.org/uniprot/Q9ZKM9 Q9ZKM9]
 
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** [http://www.uniprot.org/uniprot/Q9CGK0 Q9CGK0]
 
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** [http://www.uniprot.org/uniprot/P38088 P38088]
 
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** [http://www.uniprot.org/uniprot/Q06817 Q06817]
 
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** [http://www.uniprot.org/uniprot/Q51114 Q51114]
 
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** [http://www.uniprot.org/uniprot/P75425 P75425]
 
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** [http://www.uniprot.org/uniprot/Q55716 Q55716]
 
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** [http://www.uniprot.org/uniprot/P00960 P00960]
 
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** [http://www.uniprot.org/uniprot/P00961 P00961]
 
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** [http://www.uniprot.org/uniprot/Q8L785 Q8L785]
 
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</div>
 
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{{#set: ec-number=ec-6.1.1.14}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=glycine--trna ligase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS03125

  • common-name:
    • hola
  • transcription-direction:
    • positive
  • centisome-position:
    • 18.895792
  • left-end-position:
    • 726166
  • right-end-position:
    • 727134

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS03125&oldid=94487"