Difference between revisions of "FSU RS03125"

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(Created page with "Category:reaction == Reaction NAD-SYNTH-GLN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.5.1 ec-6.3.5.1] * direction: ** left-to-right == Reaction formula == *...")
(Created page with "Category:gene == Gene FSU_RS03125 == * common-name: ** hola * transcription-direction: ** positive * centisome-position: ** 18.895792 * left-end-position: ** 726166 *...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction NAD-SYNTH-GLN-RXN ==
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== Gene FSU_RS03125 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/6.3.5.1 ec-6.3.5.1]
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** hola
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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== Reaction formula ==
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* centisome-position:
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* 1 [[ATP]][c] '''+''' 1 [[DEAMIDO-NAD]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
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** 18.895792   
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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* Gene: [[FSU_RS11015]]
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** 726166
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** Category: [[orthology]]
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* right-end-position:
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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** 727134
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* Gene: [[FSU_RS00020]]
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== Organism(s) associated with this gene ==
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** Category: [[orthology]]
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* [[fsucgem]]
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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== Reaction(s) associated ==
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== Pathway(s)  ==
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* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
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* [[PWY-5381]], pyridine nucleotide cycling (plants):
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** Category: [[annotation]]
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** '''5''' reactions found over '''11''' reactions in the full pathway
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I (PNC VI cycle):
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{{#set: common-name=hola}}
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** '''3''' reactions found over '''6''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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* [[PWY-7761]], NAD salvage pathway II (PNC IV cycle):
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{{#set: centisome-position=18.895792    }}
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** '''3''' reactions found over '''4''' reactions in the full pathway
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{{#set: left-end-position=726166}}
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* [[PWY3O-4107]], NAD salvage pathway V (PNC V cycle):
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{{#set: right-end-position=727134}}
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** '''3''' reactions found over '''5''' reactions in the full pathway
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{{#set: organism associated=fsucgem}}
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* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde:
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{{#set: nb reaction associated=1}}
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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* [[PYRIDNUCSYN-PWY]], NAD de novo biosynthesis I (from aspartate):
 
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** '''5''' reactions found over '''6''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24385 24385]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00257 R00257]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q9PPB0 Q9PPB0]
 
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** [http://www.uniprot.org/uniprot/Q9JTY7 Q9JTY7]
 
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** [http://www.uniprot.org/uniprot/Q9CGJ4 Q9CGJ4]
 
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** [http://www.uniprot.org/uniprot/Q9Z4V9 Q9Z4V9]
 
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{{#set: ec-number=ec-6.3.5.1}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=6}}
 
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{{#set: reconstruction category=orthology}}
 
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{{#set: reconstruction tool=orthofinder}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=bthetaiotaomicron}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS03125

  • common-name:
    • hola
  • transcription-direction:
    • positive
  • centisome-position:
    • 18.895792
  • left-end-position:
    • 726166
  • right-end-position:
    • 727134

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS03125&oldid=94487"