Difference between revisions of "FSU RS14885"

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(Created page with "Category:reaction == Reaction PSERTRANSAMPYR-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.52 ec-2.6.1.52] * direction: ** reversible * common-name: ** 3-phosp...")
(Created page with "Category:gene == Gene FSU_RS14885 == == Organism(s) associated with this gene == * fsucgem == Reaction(s) associated == * ARGINASE-RXN ** Category: orthology...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction PSERTRANSAMPYR-RXN ==
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== Gene FSU_RS14885 ==
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* ec-number:
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== Organism(s) associated with this gene  ==
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** [http://enzyme.expasy.org/EC/2.6.1.52 ec-2.6.1.52]
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* [[fsucgem]]
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* direction:
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== Reaction(s) associated ==
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** reversible
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* [[ARGINASE-RXN]]
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* common-name:
 
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** 3-phosphoserine/phosphohydroxythreonine transaminase
 
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== Reaction formula ==
 
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* 1 [[3OH-4P-OH-ALPHA-KETOBUTYRATE]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-PHOSPHONOOXY-THREONINE]][c]
 
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== Gene(s) associated with this reaction  ==
 
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* Gene: [[FSU_RS04780]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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== Pathway(s) associated ==
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*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* [[CITRULBIO-PWY]]
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* Gene: [[FISUC_RS02890]]
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* [[ARG-PRO-PWY]]
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** Category: [[annotation]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[ARGASEDEG-PWY]]
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== Pathway(s)  ==
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I:
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* [[PWY-6922]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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** '''7''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[PWY-6305]]
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* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-4984]]
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* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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* [[ARG-GLU-PWY]]
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== External links  ==
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{{#set: organism associated=fsucgem}}
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* RHEA:
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{{#set: nb reaction associated=1}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16576 16576]
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{{#set: nb pathway associated=7}}
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R05085 R05085]
 
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{{#set: ec-number=ec-2.6.1.52}}
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=3-phosphoserine/phosphohydroxythreonine transaminase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=ecoli|faecalibacterium|bthetaiotaomicron|genome|bifidobacterium}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS14885

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • CITRULBIO-PWY
    • 8 reactions found over 8 reactions in the full pathway
  • ARG-PRO-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • ARGASEDEG-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6922
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6305
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-4984
    • 5 reactions found over 5 reactions in the full pathway
  • ARG-GLU-PWY
    • 2 reactions found over 2 reactions in the full pathway


Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS14885&oldid=94555"