Difference between revisions of "FSU RS14885"

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(Created page with "Category:reaction == Reaction GLYOHMETRANS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.2.1 ec-2.1.2.1] * direction: ** reversible * common-name: ** serine hydr...")
(Created page with "Category:gene == Gene FSU_RS14885 == == Organism(s) associated with this gene == * fsucgem == Reaction(s) associated == * ARGINASE-RXN ** Category: orthology...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction GLYOHMETRANS-RXN ==
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== Gene FSU_RS14885 ==
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* ec-number:
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== Organism(s) associated with this gene  ==
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** [http://enzyme.expasy.org/EC/2.1.2.1 ec-2.1.2.1]
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* [[fsucgem]]
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* direction:
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== Reaction(s) associated ==
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** reversible
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* [[ARGINASE-RXN]]
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* common-name:
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** Category: [[orthology]]
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** serine hydroxymethyltransferase
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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== Reaction formula ==
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== Pathway(s) associated ==
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* 1 [[SER]][c] '''+''' 1 [[THF-GLU-N]][c] '''<=>''' 1 [[GLY]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[WATER]][c]
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* [[CITRULBIO-PWY]]
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== Gene(s) associated with this reaction  ==
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* Gene: [[FISUC_RS12485]]
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* [[ARG-PRO-PWY]]
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** Category: [[annotation]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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* [[ARGASEDEG-PWY]]
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* Gene: [[FSU_RS14455]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** Category: [[annotation]]
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* [[PWY-6922]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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** '''7''' reactions found over '''7''' reactions in the full pathway
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== Pathway(s) ==
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* [[PWY-6305]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-3841]], folate transformations II:
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* [[PWY-4984]]
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-181]], photorespiration:
 
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** '''4''' reactions found over '''9''' reactions in the full pathway
 
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* [[GLYSYN-PWY]], glycine biosynthesis I:
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
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* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
 
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** '''9''' reactions found over '''24''' reactions in the full pathway
 
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* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis:
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-3661]], glycine betaine degradation I:
 
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** '''3''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-3661-1]], glycine betaine degradation II (mammalian):
 
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** '''1''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-1622]], formaldehyde assimilation I (serine pathway):
 
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** '''6''' reactions found over '''13''' reactions in the full pathway
 
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* [[PWY-2161]], folate polyglutamylation:
 
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-2201]], folate transformations I:
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* [[ARG-GLU-PWY]]
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** '''9''' reactions found over '''12''' reactions in the full pathway
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** '''2''' reactions found over '''2''' reactions in the full pathway
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</div>
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{{#set: organism associated=fsucgem}}
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== Reconstruction information  ==
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{{#set: nb reaction associated=1}}
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: nb pathway associated=7}}
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15484 15484]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00945 R00945]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P35623 P35623]
 
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** [http://www.uniprot.org/uniprot/P34898 P34898]
 
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** [http://www.uniprot.org/uniprot/P34899 P34899]
 
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** [http://www.uniprot.org/uniprot/P34896 P34896]
 
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** [http://www.uniprot.org/uniprot/Q9CHW7 Q9CHW7]
 
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** [http://www.uniprot.org/uniprot/P34897 P34897]
 
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** [http://www.uniprot.org/uniprot/P0A2E1 P0A2E1]
 
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** [http://www.uniprot.org/uniprot/O23254 O23254]
 
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** [http://www.uniprot.org/uniprot/O53441 O53441]
 
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** [http://www.uniprot.org/uniprot/O08370 O08370]
 
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** [http://www.uniprot.org/uniprot/P43844 P43844]
 
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** [http://www.uniprot.org/uniprot/Q58992 Q58992]
 
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** [http://www.uniprot.org/uniprot/O66776 O66776]
 
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** [http://www.uniprot.org/uniprot/Q9XAY7 Q9XAY7]
 
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** [http://www.uniprot.org/uniprot/P47634 P47634]
 
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** [http://www.uniprot.org/uniprot/Q9WZH9 Q9WZH9]
 
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** [http://www.uniprot.org/uniprot/P56089 P56089]
 
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** [http://www.uniprot.org/uniprot/O53615 O53615]
 
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** [http://www.uniprot.org/uniprot/O83349 O83349]
 
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** [http://www.uniprot.org/uniprot/Q9ZMP7 Q9ZMP7]
 
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** [http://www.uniprot.org/uniprot/O51547 O51547]
 
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** [http://www.uniprot.org/uniprot/O84439 O84439]
 
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** [http://www.uniprot.org/uniprot/P24531 P24531]
 
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** [http://www.uniprot.org/uniprot/P39148 P39148]
 
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** [http://www.uniprot.org/uniprot/P24060 P24060]
 
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** [http://www.uniprot.org/uniprot/P37292 P37292]
 
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** [http://www.uniprot.org/uniprot/P34895 P34895]
 
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** [http://www.uniprot.org/uniprot/P34894 P34894]
 
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** [http://www.uniprot.org/uniprot/P49357 P49357]
 
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** [http://www.uniprot.org/uniprot/P49358 P49358]
 
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** [http://www.uniprot.org/uniprot/P50433 P50433]
 
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** [http://www.uniprot.org/uniprot/P37291 P37291]
 
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** [http://www.uniprot.org/uniprot/P78011 P78011]
 
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** [http://www.uniprot.org/uniprot/P77962 P77962]
 
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** [http://www.uniprot.org/uniprot/Q9SVM4 Q9SVM4]
 
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** [http://www.uniprot.org/uniprot/Q9SUU0 Q9SUU0]
 
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** [http://www.uniprot.org/uniprot/Q9SZJ5 Q9SZJ5]
 
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** [http://www.uniprot.org/uniprot/O23984 O23984]
 
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** [http://www.uniprot.org/uniprot/P0A825 P0A825]
 
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** [http://www.uniprot.org/uniprot/P07511 P07511]
 
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</div>
 
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{{#set: ec-number=ec-2.1.2.1}}
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=serine hydroxymethyltransferase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=10}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS14885

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • CITRULBIO-PWY
    • 8 reactions found over 8 reactions in the full pathway
  • ARG-PRO-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • ARGASEDEG-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6922
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6305
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-4984
    • 5 reactions found over 5 reactions in the full pathway
  • ARG-GLU-PWY
    • 2 reactions found over 2 reactions in the full pathway


Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS14885&oldid=94555"