Difference between revisions of "FISUC RS00285"

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(Created page with "Category:reaction == Reaction IPPISOM-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/5.3.3.2 ec-5.3.3.2] * direction: ** reversible == Reaction formula == * 1 DELTA...")
(Created page with "Category:gene == Gene FISUC_RS00285 == * transcription-direction: ** negative * centisome-position: ** 1.454861 * left-end-position: ** 55905 * right-end-position: **...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction IPPISOM-RXN ==
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== Gene FISUC_RS00285 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/5.3.3.2 ec-5.3.3.2]
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** negative
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* direction:
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* centisome-position:
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** reversible
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** 1.454861   
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== Reaction formula ==
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* left-end-position:
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* 1 [[DELTA3-ISOPENTENYL-PP]][c] '''<=>''' 1 [[CPD-4211]][c]
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** 55905
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== Gene(s) associated with this reaction  ==
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* right-end-position:
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* Gene: [[FSU_RS07570]]
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** 57572
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** Category: [[orthology]]
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== Organism(s) associated with this gene  ==
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* [[fsucgem]]
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== Pathway(s) ==
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== Reaction(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-2043]]
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* [[PWY-7524]], mevalonate pathway III (archaea):
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** Category: [[annotation]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-6383]], mono-trans, poly-cis decaprenyl phosphate biosynthesis:
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== Pathway(s) associated ==
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6788]]
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* [[PWY-5123]], trans, trans-farnesyl diphosphate biosynthesis:
 
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6859]], all-trans-farnesol biosynthesis:
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{{#set: transcription-direction=negative}}
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** '''3''' reactions found over '''4''' reactions in the full pathway
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{{#set: centisome-position=1.454861    }}
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* [[PWY-7102]], bisabolene biosynthesis (engineered):
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{{#set: left-end-position=55905}}
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** '''3''' reactions found over '''6''' reactions in the full pathway
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{{#set: right-end-position=57572}}
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I:
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{{#set: organism associated=fsucgem}}
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: nb reaction associated=1}}
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* [[PWY-7560]], methylerythritol phosphate pathway II:
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{{#set: nb pathway associated=1}}
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-7391]], isoprene biosynthesis II (engineered):
 
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** '''1''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-922]], mevalonate pathway I:
 
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** '''1''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-6174]], mevalonate pathway II (archaea):
 
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** '''1''' reactions found over '''7''' reactions in the full pathway
 
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</div>
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23287 23287]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01123 R01123]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P15496 P15496]
 
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** [http://www.uniprot.org/uniprot/Q10132 Q10132]
 
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** [http://www.uniprot.org/uniprot/Q38929 Q38929]
 
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** [http://www.uniprot.org/uniprot/Q42553 Q42553]
 
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** [http://www.uniprot.org/uniprot/P93355 P93355]
 
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** [http://www.uniprot.org/uniprot/O81691 O81691]
 
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** [http://www.uniprot.org/uniprot/Q9SAY0 Q9SAY0]
 
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** [http://www.uniprot.org/uniprot/O81660 O81660]
 
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** [http://www.uniprot.org/uniprot/O81659 O81659]
 
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{{#set: ec-number=ec-5.3.3.2}}
 
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{{#set: direction=reversible}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=10}}
 
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{{#set: reconstruction category=orthology}}
 
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{{#set: reconstruction tool=orthofinder}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=bthetaiotaomicron}}
 

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS00285

  • transcription-direction:
    • negative
  • centisome-position:
    • 1.454861
  • left-end-position:
    • 55905
  • right-end-position:
    • 57572

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6788
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS00285&oldid=94597"