Difference between revisions of "FSU RS15260"

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(Created page with "Category:reaction == Reaction 3.1.26.4-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.26.4 ec-3.1.26.4] * direction: ** left-to-right * common-name: ** ribonuclea...")
(Created page with "Category:gene == Gene FSU_RS15260 == * common-name: ** leub * transcription-direction: ** negative * centisome-position: ** 96.980255 * left-end-position: ** 3726955 *...")
 
(8 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction 3.1.26.4-RXN ==
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== Gene FSU_RS15260 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/3.1.26.4 ec-3.1.26.4]
 
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** ribonuclease hii
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** leub
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** ribonuclease h
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* transcription-direction:
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== Reaction formula ==
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** negative
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* 1 [[RNA-DNA-hybrids]][c] '''+''' n [[WATER]][c] '''=>''' 1 [[DNA-Holder]][c] '''+''' n [[Nucleoside-Monophosphates]][c]
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* centisome-position:
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== Gene(s) associated with this reaction  ==
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** 96.980255   
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* Gene: [[FSU_RS01150]]
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* left-end-position:
 +
** 3726955
 +
* right-end-position:
 +
** 3728046
 +
== Organism(s) associated with this gene  ==
 +
* [[fsucgem]]
 +
== Reaction(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[1.1.1.83-RXN]]
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** Category: [[orthology]]
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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* [[3-ISOPROPYLMALDEHYDROG-RXN]]
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** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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* [[RXN-13158]]
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** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14986]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-18200]]
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** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-18202]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18204]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18206]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18208]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-18210]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7800]]
 +
** Category: [[orthology]]
 +
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* [[RXNQT-4165]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS15575]]
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* [[RXNQT-4168]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS13600]]
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* [[RXNQT-4171]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS14960]]
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* [[RXNQT-4174]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s)  ==
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* [[RXNQT-4178]]
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== Reconstruction information  ==
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** Category: [[annotation]]
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P52975 P52975]
 
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** [http://www.uniprot.org/uniprot/Q9CDG3 Q9CDG3]
 
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** [http://www.uniprot.org/uniprot/Q9PM39 Q9PM39]
 
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** [http://www.uniprot.org/uniprot/Q9JX40 Q9JX40]
 
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** [http://www.uniprot.org/uniprot/P43807 P43807]
 
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** [http://www.uniprot.org/uniprot/P43808 P43808]
 
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** [http://www.uniprot.org/uniprot/Q9PJA1 Q9PJA1]
 
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** [http://www.uniprot.org/uniprot/Q9CG17 Q9CG17]
 
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** [http://www.uniprot.org/uniprot/Q9JTD9 Q9JTD9]
 
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** [http://www.uniprot.org/uniprot/Q57599 Q57599]
 
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** [http://www.uniprot.org/uniprot/O44114 O44114]
 
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** [http://www.uniprot.org/uniprot/P0A7Y4 P0A7Y4]
 
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** [http://www.uniprot.org/uniprot/P10442 P10442]
 
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** [http://www.uniprot.org/uniprot/P13319 P13319]
 
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** [http://www.uniprot.org/uniprot/Q7LYY8 Q7LYY8]
 
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** [http://www.uniprot.org/uniprot/P0A2B9 P0A2B9]
 
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** [http://www.uniprot.org/uniprot/Q04740 Q04740]
 
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** [http://www.uniprot.org/uniprot/Q49050 Q49050]
 
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** [http://www.uniprot.org/uniprot/O69014 O69014]
 
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** [http://www.uniprot.org/uniprot/Q54222 Q54222]
 
 
</div>
 
</div>
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{{#set: ec-number=ec-3.1.26.4}}
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== Pathway(s) associated ==
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{{#set: direction=left-to-right}}
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* [[PWY0-1465]]
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{{#set: common-name=ribonuclease h|ribonuclease hii}}
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: nb gene associated=4}}
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* [[LEUSYN-PWY]]
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{{#set: nb pathway associated=0}}
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** '''6''' reactions found over '''6''' reactions in the full pathway
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{{#set: reconstruction category=annotation}}
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* [[PWY-6871]]
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{{#set: reconstruction tool=pathwaytools}}
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** '''6''' reactions found over '''7''' reactions in the full pathway
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{{#set: reconstruction comment=n.a}}
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* [[PWY-7396]]
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{{#set: reconstruction source=genome}}
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** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWYQT-4450]]
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** '''5''' reactions found over '''30''' reactions in the full pathway
 +
{{#set: common-name=leub}}
 +
{{#set: transcription-direction=negative}}
 +
{{#set: centisome-position=96.980255    }}
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{{#set: left-end-position=3726955}}
 +
{{#set: right-end-position=3728046}}
 +
{{#set: organism associated=fsucgem}}
 +
{{#set: nb reaction associated=16}}
 +
{{#set: nb pathway associated=5}}

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS15260

  • common-name:
    • leub
  • transcription-direction:
    • negative
  • centisome-position:
    • 96.980255
  • left-end-position:
    • 3726955
  • right-end-position:
    • 3728046

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1465
    • 1 reactions found over 1 reactions in the full pathway
  • LEUSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6871
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7396
    • 2 reactions found over 8 reactions in the full pathway
  • PWYQT-4450
    • 5 reactions found over 30 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS15260&oldid=94618"