Difference between revisions of "FSU RS15260"

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(Created page with "Category:reaction == Reaction CHLORAMPHENICOL-O-ACETYLTRANSFERASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.28 ec-2.3.1.28] * direction: ** left-to-right *...")
(Created page with "Category:gene == Gene FSU_RS15260 == * common-name: ** leub * transcription-direction: ** negative * centisome-position: ** 96.980255 * left-end-position: ** 3726955 *...")
 
(5 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction CHLORAMPHENICOL-O-ACETYLTRANSFERASE-RXN ==
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== Gene FSU_RS15260 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.3.1.28 ec-2.3.1.28]
 
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** chloramphenicol acetyltransferase
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** leub
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== Reaction formula ==
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* transcription-direction:
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* 1 [[ACETYL-COA]][c] '''+''' 1 [[CHLORAMPHENICOL]][c] '''=>''' 1 [[CHLORAMPHENICOL-3-ACETATE]][c] '''+''' 1 [[CO-A]][c]
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** negative
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[FSU_RS04900]]
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** 96.980255   
 +
* left-end-position:
 +
** 3726955
 +
* right-end-position:
 +
** 3728046
 +
== Organism(s) associated with this gene  ==
 +
* [[fsucgem]]
 +
== Reaction(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[1.1.1.83-RXN]]
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** Category: [[orthology]]
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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* [[3-ISOPROPYLMALDEHYDROG-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* [[RXN-13158]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14986]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18200]]
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** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18202]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18204]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18206]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18208]]
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** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18210]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7800]]
 +
** Category: [[orthology]]
 +
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* [[RXNQT-4165]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS03010]]
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* [[RXNQT-4168]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s)  ==
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* [[RXNQT-4171]]
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== Reconstruction information  ==
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** Category: [[annotation]]
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* [[RXNQT-4174]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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** Category: [[annotation]]
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* RHEA:
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18424 18424]
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* [[RXNQT-4178]]
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* LIGAND-RXN:
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** Category: [[annotation]]
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** [http://www.genome.jp/dbget-bin/www_bget?R03065 R03065]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P07641 P07641]
 
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** [http://www.uniprot.org/uniprot/P26838 P26838]
 
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** [http://www.uniprot.org/uniprot/Q02736 Q02736]
 
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** [http://www.uniprot.org/uniprot/P25309 P25309]
 
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** [http://www.uniprot.org/uniprot/P26825 P26825]
 
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** [http://www.uniprot.org/uniprot/P36883 P36883]
 
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** [http://www.uniprot.org/uniprot/P26826 P26826]
 
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** [http://www.uniprot.org/uniprot/P23364 P23364]
 
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** [http://www.uniprot.org/uniprot/P20074 P20074]
 
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** [http://www.uniprot.org/uniprot/P22782 P22782]
 
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** [http://www.uniprot.org/uniprot/P62579 P62579]
 
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** [http://www.uniprot.org/uniprot/Q03058 Q03058]
 
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** [http://www.uniprot.org/uniprot/Q59436 Q59436]
 
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** [http://www.uniprot.org/uniprot/P11504 P11504]
 
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** [http://www.uniprot.org/uniprot/P22615 P22615]
 
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** [http://www.uniprot.org/uniprot/P22616 P22616]
 
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** [http://www.uniprot.org/uniprot/Q54803 Q54803]
 
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** [http://www.uniprot.org/uniprot/P50869 P50869]
 
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** [http://www.uniprot.org/uniprot/O68047 O68047]
 
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** [http://www.uniprot.org/uniprot/P00487 P00487]
 
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** [http://www.uniprot.org/uniprot/P62577 P62577]
 
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** [http://www.uniprot.org/uniprot/P00484 P00484]
 
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** [http://www.uniprot.org/uniprot/P00486 P00486]
 
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** [http://www.uniprot.org/uniprot/P00485 P00485]
 
 
</div>
 
</div>
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{{#set: ec-number=ec-2.3.1.28}}
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== Pathway(s) associated ==
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{{#set: direction=left-to-right}}
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* [[PWY0-1465]]
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{{#set: common-name=chloramphenicol acetyltransferase}}
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: nb gene associated=2}}
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* [[LEUSYN-PWY]]
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{{#set: nb pathway associated=0}}
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** '''6''' reactions found over '''6''' reactions in the full pathway
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{{#set: reconstruction category=annotation}}
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* [[PWY-6871]]
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{{#set: reconstruction tool=pathwaytools}}
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** '''6''' reactions found over '''7''' reactions in the full pathway
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{{#set: reconstruction comment=n.a}}
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* [[PWY-7396]]
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{{#set: reconstruction source=genome}}
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** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWYQT-4450]]
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** '''5''' reactions found over '''30''' reactions in the full pathway
 +
{{#set: common-name=leub}}
 +
{{#set: transcription-direction=negative}}
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{{#set: centisome-position=96.980255    }}
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{{#set: left-end-position=3726955}}
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{{#set: right-end-position=3728046}}
 +
{{#set: organism associated=fsucgem}}
 +
{{#set: nb reaction associated=16}}
 +
{{#set: nb pathway associated=5}}

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS15260

  • common-name:
    • leub
  • transcription-direction:
    • negative
  • centisome-position:
    • 96.980255
  • left-end-position:
    • 3726955
  • right-end-position:
    • 3728046

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1465
    • 1 reactions found over 1 reactions in the full pathway
  • LEUSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6871
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7396
    • 2 reactions found over 8 reactions in the full pathway
  • PWYQT-4450
    • 5 reactions found over 30 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS15260&oldid=94618"