Difference between revisions of "FSU RS15260"

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(Created page with "Category:gene == Gene FSU_RS13425 == * transcription-direction: ** positive * centisome-position: ** 84.64709 * left-end-position: ** 3252991 * right-end-position: **...")
(Created page with "Category:gene == Gene FSU_RS15260 == * common-name: ** leub * transcription-direction: ** negative * centisome-position: ** 96.980255 * left-end-position: ** 3726955 *...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene FSU_RS13425 ==
+
== Gene FSU_RS15260 ==
 +
* common-name:
 +
** leub
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* centisome-position:
 
* centisome-position:
−
** 84.64709    
+
** 96.980255    
 
* left-end-position:
 
* left-end-position:
−
** 3252991
+
** 3726955
 
* right-end-position:
 
* right-end-position:
−
** 3254076
+
** 3728046
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[fsucgem]]
 
* [[fsucgem]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HISTAMINOTRANS-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[1.1.1.83-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* [[3-ISOPROPYLMALDEHYDROG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
Line 18: Line 24:
 
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
−
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
+
* [[RXN-13158]]
−
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
* [[TYROSINE-AMINOTRANSFERASE-RXN]]
+
* [[RXN-14986]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18200]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18202]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18204]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18206]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18208]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18210]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7800]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
+
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
−
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
+
* [[RXNQT-4165]]
−
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNQT-4168]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNQT-4171]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNQT-4174]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNQT-4178]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY0-1465]]
−
* [[HISTSYN-PWY]]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-3581]]
 
−
** '''2''' reactions found over '''11''' reactions in the full pathway
 
−
* [[TYRSYN]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5048]]
 
−
** '''1''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5886]]
 
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-8016]]
+
* [[LEUSYN-PWY]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY3O-4108]]
+
* [[PWY-6871]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5151]]
+
* [[PWY-7396]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[TYRFUMCAT-PWY]]
+
* [[PWYQT-4450]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''30''' reactions in the full pathway
−
* [[PWY-7514]]
+
{{#set: common-name=leub}}
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-7518]]
+
{{#set: centisome-position=96.980255   }}
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: left-end-position=3726955}}
−
* [[PWY-5754]]
+
{{#set: right-end-position=3728046}}
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: centisome-position=84.64709   }}
 
−
{{#set: left-end-position=3252991}}
 
−
{{#set: right-end-position=3254076}}
 
 
{{#set: organism associated=fsucgem}}
 
{{#set: organism associated=fsucgem}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=16}}
−
{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS15260

  • common-name:
    • leub
  • transcription-direction:
    • negative
  • centisome-position:
    • 96.980255
  • left-end-position:
    • 3726955
  • right-end-position:
    • 3728046

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1465
    • 1 reactions found over 1 reactions in the full pathway
  • LEUSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6871
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7396
    • 2 reactions found over 8 reactions in the full pathway
  • PWYQT-4450
    • 5 reactions found over 30 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS15260&oldid=94618"