Difference between revisions of "FSU RS02760"

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(Created page with "Category:reaction == Reaction 1.1.1.8-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.8 ec-1.1.1.8] * direction: ** left-to-right == Reaction formula == * 1 DI...")
(Created page with "Category:gene == Gene FSU_RS02760 == * transcription-direction: ** positive * centisome-position: ** 16.730375 * left-end-position: ** 642949 * right-end-position: **...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction 1.1.1.8-RXN ==
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== Gene FSU_RS02760 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/1.1.1.8 ec-1.1.1.8]
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** positive
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* direction:
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* centisome-position:
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** left-to-right
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** 16.730375   
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== Reaction formula ==
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* left-end-position:
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* 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[NAD]][c]
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** 642949
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== Gene(s) associated with this reaction  ==
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* right-end-position:
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* Gene: [[FSU_RS13265]]
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** 643911
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[SERINE-O-ACETTRAN-RXN]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
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*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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== Pathway(s) associated ==
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== Pathway(s) ==
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* [[PWY-6936]]
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* [[PWY-6118]], glycerol-3-phosphate shuttle:
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7411]], phosphatidate biosynthesis (yeast):
 
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered):
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* [[PWY-7870]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[CYSTSYN-PWY]]
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* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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* [[PWY-7274]]
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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** '''1''' reactions found over '''6''' reactions in the full pathway
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== External links  ==
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{{#set: transcription-direction=positive}}
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* LIGAND-RXN:
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{{#set: centisome-position=16.730375    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00842 R00842]
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{{#set: left-end-position=642949}}
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* UNIPROT:
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{{#set: right-end-position=643911}}
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** [http://www.uniprot.org/uniprot/P13707 P13707]
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{{#set: organism associated=fsucgem}}
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** [http://www.uniprot.org/uniprot/P08507 P08507]
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{{#set: nb reaction associated=1}}
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** [http://www.uniprot.org/uniprot/O25614 O25614]
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{{#set: nb pathway associated=4}}
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** [http://www.uniprot.org/uniprot/Q9JWH0 Q9JWH0]
 
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** [http://www.uniprot.org/uniprot/P43798 P43798]
 
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** [http://www.uniprot.org/uniprot/O29390 O29390]
 
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** [http://www.uniprot.org/uniprot/P46919 P46919]
 
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** [http://www.uniprot.org/uniprot/P07735 P07735]
 
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** [http://www.uniprot.org/uniprot/P13706 P13706]
 
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** [http://www.uniprot.org/uniprot/Q00055 Q00055]
 
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** [http://www.uniprot.org/uniprot/P34517 P34517]
 
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** [http://www.uniprot.org/uniprot/P0A6S7 P0A6S7]
 
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** [http://www.uniprot.org/uniprot/P21695 P21695]
 
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** [http://www.uniprot.org/uniprot/P41911 P41911]
 
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** [http://www.uniprot.org/uniprot/P90593 P90593]
 
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{{#set: ec-number=ec-1.1.1.8}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=3}}
 
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{{#set: reconstruction category=orthology}}
 
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{{#set: reconstruction tool=orthofinder}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=plantarum|bthetaiotaomicron|faecalibacterium}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS02760

  • transcription-direction:
    • positive
  • centisome-position:
    • 16.730375
  • left-end-position:
    • 642949
  • right-end-position:
    • 643911

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6936
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7870
    • 1 reactions found over 4 reactions in the full pathway
  • CYSTSYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7274
    • 1 reactions found over 6 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS02760&oldid=94623"