Difference between revisions of "FSU RS02125"

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(Created page with "Category:reaction == Reaction TRANS-RXN-141A == * direction: ** left-to-right == Reaction formula == * 1 CO+2[e] '''=>''' 1 CO+2[c] == Gene(s) associated with this...")
(Created page with "Category:gene == Gene FSU_RS02125 == * transcription-direction: ** positive * centisome-position: ** 12.923224 * left-end-position: ** 496640 * right-end-position: **...")
 
(12 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction TRANS-RXN-141A ==
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== Gene FSU_RS02125 ==
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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== Reaction formula ==
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* centisome-position:
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* 1 [[CO+2]][e] '''=>''' 1 [[CO+2]][c]
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** 12.923224   
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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* Gene: [[FSU_RS06185]]
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** 496640
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* right-end-position:
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** 498025
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[PRPPAMIDOTRANS-RXN]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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* Gene: [[FSU_RS10565]]
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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== Pathway(s)  ==
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== Pathway(s) associated ==
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== Reconstruction information  ==
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* [[PWY-6277]]
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* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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** '''7''' reactions found over '''5''' reactions in the full pathway
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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* [[PWY-6121]]
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== External links  ==
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* RHEA:
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* [[PWY-6122]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32780 32780]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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{{#set: direction=left-to-right}}
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* [[PWY-7282]]
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{{#set: nb gene associated=2}}
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** '''4''' reactions found over '''9''' reactions in the full pathway
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{{#set: nb pathway associated=0}}
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{{#set: transcription-direction=positive}}
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{{#set: reconstruction category=orthology}}
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{{#set: centisome-position=12.923224    }}
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{{#set: reconstruction tool=orthofinder}}
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{{#set: left-end-position=496640}}
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{{#set: reconstruction comment=n.a}}
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{{#set: right-end-position=498025}}
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{{#set: reconstruction source=ecoli|bifidobacterium}}
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{{#set: organism associated=fsucgem}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS02125

  • transcription-direction:
    • positive
  • centisome-position:
    • 12.923224
  • left-end-position:
    • 496640
  • right-end-position:
    • 498025

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6277
    • 7 reactions found over 5 reactions in the full pathway
  • PWY-6121
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6122
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7282
    • 4 reactions found over 9 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS02125&oldid=94635"