Difference between revisions of "FSU RS02125"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.14.99.60 ec-1.14.99.60] * direction: ** left-to-rig...")
(Created page with "Category:gene == Gene FSU_RS02125 == * transcription-direction: ** positive * centisome-position: ** 12.923224 * left-end-position: ** 496640 * right-end-position: **...")
 
(6 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN ==
+
== Gene FSU_RS02125 ==
−
* ec-number:
+
* transcription-direction:
−
** [http://enzyme.expasy.org/EC/1.14.99.60 ec-1.14.99.60]
+
** positive
−
* direction:
+
* centisome-position:
−
** left-to-right
+
** 12.923224   
−
* synonymous:
+
* left-end-position:
−
** 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
+
** 496640
−
== Reaction formula ==
+
* right-end-position:
−
* 1 [[Donor-H2]][c] '''+''' 1 [[OCTAPRENYL-METHYL-METHOXY-BENZQ]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[Acceptor]][c] '''+''' 1 [[OCTAPRENYL-METHYL-OH-METHOXY-BENZQ]][c] '''+''' 1 [[WATER]][c]
+
** 498025
−
== Gene(s) associated with this reaction  ==
+
== Organism(s) associated with this gene  ==
−
== Pathway(s)  ==
+
* [[fsucgem]]
−
* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic):
+
== Reaction(s) associated ==
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
* [[PRPPAMIDOTRANS-RXN]]
−
* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic):
+
** Category: [[annotation]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
== Reconstruction information  ==
+
** Category: [[orthology]]
−
* category: [[manual]]; source: [[reactions_add_ibrahim_18092020]]; tool: [[curation]]; comment: to improve flux
+
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
−
== External links  ==
+
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
−
* RHEA:
+
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29404 29404]
+
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
−
{{#set: ec-number=ec-1.14.99.60}}
+
== Pathway(s) associated ==
−
{{#set: direction=left-to-right}}
+
* [[PWY-6277]]
−
{{#set: synonymous=2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase}}
+
** '''7''' reactions found over '''5''' reactions in the full pathway
−
{{#set: nb gene associated=0}}
+
* [[PWY-6121]]
−
{{#set: nb pathway associated=2}}
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
{{#set: reconstruction category=manual}}
+
* [[PWY-6122]]
−
{{#set: reconstruction tool=curation}}
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
{{#set: reconstruction comment=to improve flux}}
+
* [[PWY-7282]]
−
{{#set: reconstruction source=reactions_add_ibrahim_18092020}}
+
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: centisome-position=12.923224    }}
 +
{{#set: left-end-position=496640}}
 +
{{#set: right-end-position=498025}}
 +
{{#set: organism associated=fsucgem}}
 +
{{#set: nb reaction associated=1}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS02125

  • transcription-direction:
    • positive
  • centisome-position:
    • 12.923224
  • left-end-position:
    • 496640
  • right-end-position:
    • 498025

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6277
    • 7 reactions found over 5 reactions in the full pathway
  • PWY-6121
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6122
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7282
    • 4 reactions found over 9 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS02125&oldid=94635"