Difference between revisions of "FSU RS05775"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction COBINPGUANYLYLTRANS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.62 ec-2.7.7.62] * direction: ** left-to-right == Reaction formu...")
(Created page with "Category:gene == Gene FSU_RS05775 == * transcription-direction: ** negative * centisome-position: ** 36.111774 * left-end-position: ** 1387777 * right-end-position: **...")
 
(11 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction COBINPGUANYLYLTRANS-RXN ==
+
== Gene FSU_RS05775 ==
−
* ec-number:
+
* transcription-direction:
−
** [http://enzyme.expasy.org/EC/2.7.7.62 ec-2.7.7.62]
+
** negative
−
* direction:
+
* centisome-position:
−
** left-to-right
+
** 36.111774   
−
== Reaction formula ==
+
* left-end-position:
−
* 1 [[ADENOSYLCOBINAMIDE-P]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ADENOSYLCOBINAMIDE-GDP]][c] '''+''' 1 [[PPI]][c]
+
** 1387777
−
== Gene(s) associated with this reaction  ==
+
* right-end-position:
−
== Pathway(s)  ==
+
** 1389156
−
* [[PWY-7962]], adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide:
+
== Organism(s) associated with this gene  ==
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
* [[fsucgem]]
−
* [[PWY-7971]], adenosylcobinamide-GDP salvage from cobinamide I:
+
== Reaction(s) associated ==
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
* [[2.7.7.13-RXN]]
−
* [[COBALSYN-PWY]], superpathway of adenosylcobalamin salvage from cobinamide I:
+
** Category: [[annotation]]
−
** '''6''' reactions found over '''5''' reactions in the full pathway
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PWY-7972]], adenosylcobinamideGDP salvage from cobinamide II:
+
* [[MANNPGUANYLTRANGDP-RXN]]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** Category: [[manual]]
−
* [[PWY-6269]], superpathway of adenosylcobalamin salvage from cobinamide II:
+
*** source: [[add_expert_reactions]]; tool: [[unknown-tool]]; comment: added to improve flux in sugars
−
** '''7''' reactions found over '''6''' reactions in the full pathway
+
* [[MANNPISOM-RXN]]
−
== Reconstruction information  ==
+
** Category: [[annotation]]
−
* category: [[manual]]; source: [[reactions_add_adenosylcobalamin]]; tool: [[curation]]; comment: added to reach adenosylcobinamide-gdp
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
== External links  ==
+
== Pathway(s) associated ==
−
* RHEA:
+
* [[PWY-5659]]
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22712 22712]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* LIGAND-RXN:
+
* [[PWY-882]]
−
** [http://www.genome.jp/dbget-bin/www_bget?R05222 R05222]
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
{{#set: ec-number=ec-2.7.7.62}}
+
* [[PWY-3881]]
−
{{#set: direction=left-to-right}}
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
{{#set: nb gene associated=0}}
+
* [[PWY-7586]]
−
{{#set: nb pathway associated=5}}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
{{#set: reconstruction category=manual}}
+
* [[PWY-6992]]
−
{{#set: reconstruction tool=curation}}
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
{{#set: reconstruction comment=added to reach adenosylcobinamide-gdp}}
+
* [[PWY-3861]]
−
{{#set: reconstruction source=reactions_add_adenosylcobalamin}}
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[MANNCAT-PWY]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-7456]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: centisome-position=36.111774    }}
 +
{{#set: left-end-position=1387777}}
 +
{{#set: right-end-position=1389156}}
 +
{{#set: organism associated=fsucgem}}
 +
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=8}}

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS05775

  • transcription-direction:
    • negative
  • centisome-position:
    • 36.111774
  • left-end-position:
    • 1387777
  • right-end-position:
    • 1389156

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5659
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-882
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-3881
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7586
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6992
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-3861
    • 1 reactions found over 4 reactions in the full pathway
  • MANNCAT-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7456
    • 3 reactions found over 7 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS05775&oldid=94652"