Difference between revisions of "FISUC RS04960"

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(Created page with "Category:reaction == Reaction RXN0-5038 == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.4.53 ec-3.1.4.53] * direction: ** left-to-right == Reaction formula == * 1 CA...")
(Created page with "Category:gene == Gene FISUC_RS04960 == * common-name: ** aepx * transcription-direction: ** negative * centisome-position: ** 31.819597 * left-end-position: ** 1222711...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction RXN0-5038 ==
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== Gene FISUC_RS04960 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/3.1.4.53 ec-3.1.4.53]
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** aepx
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* direction:
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* transcription-direction:
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** left-to-right
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** negative
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== Reaction formula ==
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* centisome-position:
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* 1 [[CAMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c]
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** 31.819597   
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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* Gene: [[FSU_RS03545]]
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** 1222711
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** Category: [[orthology]]
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* right-end-position:
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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** 1224021
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* Gene: [[FSU_RS07905]]
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== Organism(s) associated with this gene  ==
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** Category: [[orthology]]
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* [[fsucgem]]
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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== Reaction(s) associated ==
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* Gene: [[FSU_RS02505]]
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* [[PHOSPHOENOLPYRUVATE-MUTASE-RXN]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS09100]]
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== Pathway(s) associated ==
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** Category: [[orthology]]
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* [[PWY-6682]]
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*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* Gene: [[FSU_RS00330]]
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* [[PWY-6839]]
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** Category: [[orthology]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* [[PWY-7769]]
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== Pathway(s)  ==
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** '''2''' reactions found over '''25''' reactions in the full pathway
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== Reconstruction information  ==
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* [[PWY-7419]]
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* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
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** '''1''' reactions found over '''10''' reactions in the full pathway
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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* [[PWY-7510]]
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== External links  ==
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** '''2''' reactions found over '''12''' reactions in the full pathway
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* RHEA:
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* [[PWY-5757]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25278 25278]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* LIGAND-RXN:
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* [[PWY-6322]]
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** [http://www.genome.jp/dbget-bin/www_bget?R00191 R00191]
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** '''2''' reactions found over '''25''' reactions in the full pathway
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{{#set: ec-number=ec-3.1.4.53}}
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{{#set: common-name=aepx}}
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{{#set: direction=left-to-right}}
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{{#set: transcription-direction=negative}}
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{{#set: nb gene associated=5}}
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{{#set: centisome-position=31.819597    }}
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{{#set: nb pathway associated=0}}
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{{#set: left-end-position=1222711}}
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{{#set: reconstruction category=orthology}}
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{{#set: right-end-position=1224021}}
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{{#set: reconstruction tool=orthofinder}}
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{{#set: organism associated=fsucgem}}
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{{#set: reconstruction comment=n.a}}
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{{#set: nb reaction associated=1}}
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{{#set: reconstruction source=plantarum|ecoli}}
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{{#set: nb pathway associated=7}}

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS04960

  • common-name:
    • aepx
  • transcription-direction:
    • negative
  • centisome-position:
    • 31.819597
  • left-end-position:
    • 1222711
  • right-end-position:
    • 1224021

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6682
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6839
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7769
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-7419
    • 1 reactions found over 10 reactions in the full pathway
  • PWY-7510
    • 2 reactions found over 12 reactions in the full pathway
  • PWY-5757
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6322
    • 2 reactions found over 25 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS04960&oldid=94662"