Difference between revisions of "FISUC RS03645"

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(Created page with "Category:reaction == Reaction RXN-12093 == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.20 ec-6.3.4.20] * direction: ** left-to-right * common-name: ** 7-cyano-7-dea...")
(Created page with "Category:gene == Gene FISUC_RS03645 == * transcription-direction: ** positive * centisome-position: ** 22.586376 * left-end-position: ** 867912 * right-end-position: *...")
 
(13 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction RXN-12093 ==
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== Gene FISUC_RS03645 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/6.3.4.20 ec-6.3.4.20]
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** positive
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* direction:
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* centisome-position:
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** left-to-right
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** 22.586376   
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* common-name:
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* left-end-position:
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** 7-cyano-7-deazaguanine synthase quec
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** 867912
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== Reaction formula ==
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* right-end-position:
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* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CPD-13043]][c] '''=>''' 1 [[7-CYANO-7-DEAZAGUANINE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[WATER]][c]
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** 868910
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[FISUC_RS14845]]
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[ALDOSE-1-EPIMERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS01035]]
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* [[ALDOSE1EPIM-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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== Pathway(s) associated ==
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* [[PWY0-1466]]
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== Pathway(s) ==
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6703]], preQ0 biosynthesis:
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* [[PWY-6317]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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** '''3''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[PWY66-422]]
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: transcription-direction=positive}}
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== External links  ==
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{{#set: centisome-position=22.586376    }}
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* RHEA:
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{{#set: left-end-position=867912}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27983 27983]
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{{#set: right-end-position=868910}}
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{{#set: ec-number=ec-6.3.4.20}}
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{{#set: organism associated=fsucgem}}
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{{#set: direction=left-to-right}}
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{{#set: nb reaction associated=2}}
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{{#set: common-name=7-cyano-7-deazaguanine synthase quec}}
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{{#set: nb pathway associated=3}}
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=ecoli|genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS03645

  • transcription-direction:
    • positive
  • centisome-position:
    • 22.586376
  • left-end-position:
    • 867912
  • right-end-position:
    • 868910

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1466
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6317
    • 3 reactions found over 5 reactions in the full pathway
  • PWY66-422
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS03645&oldid=94694"